| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0234 |
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| Symbol | metH |
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| ID | 3671376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 255446 |
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| End bp | 259159 |
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| Gene Length | 3714 bp |
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| Protein Length | 1237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637708895 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_313992 |
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| Protein GI | 74316252 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.545849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGATT GCCCTGCCAG CCTCACGACC ATGTCCCGCA CCGACCTGCT GCATTCCCTG
CTCGCCCAGC GCATCCTCGT CCTCGACGGC GCGATGGGAA CGATGATCCA GTCGTACAAG
CTCGGCGAGG CGGACTACCG GGGTGAGCGC TTTGCCGATT TTGCCCACGA CCTCAAGGGC
AACAACGACC TGCTATGCCT GACGCAGCCC GCGATCATCA AGGAAATCCA CGCCAAGTAC
CTCGCGGCCG GCGCCGACAT CCTCGAGACC AACAGCTTCA ACGCGACCGC GATCTCGATG
GCCGACTACC GTATGGAGCA CCTGGTGCCG GAGCTCAACT TCGCCGCCGC CAAACTCGCG
CGCGAAGCCG CCGACGAGGC GACCGCGCAG AACCCGGCCA AGCCGCGCTT CGTCGCCGGC
GTGCTCGGGC CGACGTCACG CACGGCGACG ATCTCGCCCG ACGTCAACGA CCCGGGCTTC
CGCAATGTTA CGTTCGACCA ACTGCGCGAA GCCTACCTCG AGGCGATCGA CGGCCTGGTC
AAGGGTGGCG CCGACATCCT GATGGTCGAG ACGATTTTCG ATACGCTCAA CGCCAAGGCT
GCGCTGTTCG CGATCGAGGA ATATTTCGAG ATCAATAACA TGCGACTGCC CGTGATGATC
TCGGGCACGA TCACCGACGC GTCCGGCCGC ACGCTCTCTG GCCAGACCGG CGAAGCGTTC
TGGAATTCGG TGCGCCACGC GCGCCCGCTG TCGATCGGCC TGAACTGCGC GCTTGGGCCG
GATCTCTTGC GGCAATACGT CGAAGAACTA TCGAACAAGG CCGAGGTCTT CATCTCGGCC
CACCCCAACG CCGGCCTGCC CAACGCCTTC GGTGAATACG ACATGGACGG CGCCGAAATG
GCGAAGCACA TCGGCGAGTG GGCACGCGCT GGGCTGCTCA ACATCGTCGG CGGCTGCTGC
GGCACCTCGC CTTCGCACAT TGCGGCCATC GCCAAGGCCG TCGAGGGCGT CGCGCCGCGC
GTGCCGCCCG TGCTCGAGCC GGCGATGCGC CTGTCGGGGC TCGAGCCGTT CAACGTTGGG
AAAGATTCGC TCTTCGTCAA CGTCGGCGAG CGCACCAACG TCACCGGCTC CAAGGCCTTC
GCGCGGATGA TCCTCGAAGG CCGCTATGAC GACGCCTTGT CGGTGGCGCG CCAGCAGGTC
GAGAACGGCG CCCAGGTGAT CGACATCAAC ATGGACGAGG GCATGCTCGA CGCCGAGGCG
GCGATGGTGC GCTTCCTCCA TCTCATTGCC TCGGAGCCCG ATATCGCGCG GGTGCCGATC
ATGATCGACT CGTCGAAGTG GAACGTCATC GAGGCCGGCC TGAAGTGCAT CCAGGGCAAG
GGCATCGTTA ATTCAATTTC CATGAAGGAA GGCGAAGCCG AATTCATCGA GCGGGCGAAG
CTGTGCCTGC GCTACGGCGC AGCGGTAATC GTGATGGCCT TCGACGAGAC CGGCCAGGCC
GACACCTATG CGCGCAAGAC CGAGATCTGC ACCCGCGCCT ACAAGCTCTT GACCGAGACG
GTCGGCTTCC CGGCCGAGGA CATCATCTTC GACCCCAACA TCTTCGCGGT TGCGACCGGC
ATCGAGGAGC ACGCCAACTA CGCTGTTGAT TTTATTGAAG CCACGCGCTG GATCCGCCAG
AACCTGCCGT ATGCGCACGT CTCTGGCGGG GTGTCGAACG TGAGCTTCTC GTTCCGCGGC
AACGACGCGG TGCGCGAGGC GATCCACACC GCCTTCCTCT ACCACGCGAT CCAGGCCGGC
ATGGACATGG GCATCGTCAA CGCCGGCCAG CTCGGCGTCT ATGAGAACCT CGACCCGGAG
CTGAAGGAAC GCGTCGAGGA CGTCTTGCTG AACCGCCGCG CCGACGCGAC CGAGCGCCTC
GTCGCCTTCG CTGAAGGCGT GAAGGGCGGC GCCAAGGAGA AGGTCGAGGA CCTCGCCTGG
CGCAGCCTGC CAGTCAACGA ACGGCTCACC CACGCGCTGG TCCAGGGCAT CACCCAGTAC
ATCGTCGAGG ACACGGAAGC CGCCCGCCTC GAGGCCGAAC GCCCACTGCA CGTGATCGAA
GGCCCGCTGA TGGCCGGCAT GAACGTCGTC GGCGACCTCT TCGGCGCCGG CAAGATGTTC
CTGCCGCAGG TCGTGAAGTC GGCGCGCGTA ATGAAGCAGG CCGTCGCGCA CCTGATCCCC
TACATCGAGG CCGACAAGCG CGCCGGCGAT TCGCAGAGCG CAGGCAAGAT CGTCATGGCG
ACGGTCAAGG GCGACGTCCA CGACATCGGC AAAAACATCG TCGGCGTCGT GCTCGGCTGC
AACGGCTACG AAATCGTCGA TCTGGGGGTC ATGGTGCCGG CGCAGAAGAT TCTCGACGCC
GCGCGCGAAC ACAAGGCCGA CATCATCGGT CTCTCCGGCC TGATCACGCC CTCGCTCGAG
GAAATGGCGC ACGTGGCGAA GGAAATGCAG CGCCAGGGCT TCACGATACC GCTCCTGATC
GGCGGGGCGA CGACGTCACT CGCGCACACG GCGGTCAAGA TCGAGCCGAA TTACGAGCAC
CCGGTGGTCT ACGTGAAGGA CGCGTCGCGC GCGGTCGGCG TGTGCACCCA ATTGCTGTCG
GGCGAATTGC GCGACGCATT CGCGGCCGAG GTCCGTGCCG ACTACGCGCA GACGCGCGCG
CGCCACCTCA AGCACAAGTC GGATACCGCC CGGCTGACGC TGGCCGATGC GCGCGCCAAC
AAGTTCGGCA TCGACTGGGC GAGCTACACG CCGCCTGTTC CGAACCAGCC CGGCGTGCAT
GTATTGAAGG CCTACGACCT GGCGAAACTG GTCGAGACGA TCGACTGGAC GCCGTTCTTC
GCGTCCTGGG AACTGCACGG AAAGTATCCG AAGATTCTCG ACGACGAAGT GGTCGGCGCC
GAGGCGACGA AGCTCTTCTC CGATGCGCAG GCGATGCTGA ACAGGATGGT CGCGGAGAAC
TGGGTCGAGG CGCGCGCGGT CTTCGGCCTC TTTCCCGCCA ACGCCGTCGA CGACGACATC
GAGGTGTACG CCGATGAATC TCGCTCGCAA GCCCTGACCA CGTGGCACAA CCTGCGCCAG
CAGGCGAAGA AGCCCGAGGG TCGCGCCAAC CTGTGTCTCG CCGACTTCGT CGCGCCGAAG
GCGAGTGGGC TAAAGGATTA TCTGGGCGCC TTCGTCGTGA CCGCCGGCAT CGGCGAGGAC
GAGCGGGCGA AGGCCTTCGA GGCCGCGCAC GACGACTACT CGGCGATCCT GTTCAAGTCG
CTGTGCGACC GCCTGGCCGA AGCCTTCGCC GAGCACCTGC ATCTGCGCGT GCGCCGGGAA
TTCTGGGGCT ACGCCGCCGA CGAAGCGCTG CCCAACGATG ACCTGATCGC CGAGAAGTAC
CGCGGCATCC GTCCGGCGCC CGGCTACCCG GCCTGCCCGG AGCACAGCGA GAAAGCGGCG
CTCTTCGGAC TGCTCGACGC GACGAACGCG ATCGGCGTCG AGTTGACGGA AAATTTCGCG
ATGTGGCCGG GCGCTGCCGT GTCGGGCTTC TACCTTTCGC ACCCCGACAG CCAGTATTTC
GCGGTGGCGA AGATCGAGCG CGATCAGGTC GAGGACTACG CGCGGCGCAA GGGATGGGAT
GTGAAGACGG CGGAACGGTG GCTGGGGCCG AACCTCGGCT ACCAGCCGGA GTAA
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| Protein sequence | MRDCPASLTT MSRTDLLHSL LAQRILVLDG AMGTMIQSYK LGEADYRGER FADFAHDLKG
NNDLLCLTQP AIIKEIHAKY LAAGADILET NSFNATAISM ADYRMEHLVP ELNFAAAKLA
REAADEATAQ NPAKPRFVAG VLGPTSRTAT ISPDVNDPGF RNVTFDQLRE AYLEAIDGLV
KGGADILMVE TIFDTLNAKA ALFAIEEYFE INNMRLPVMI SGTITDASGR TLSGQTGEAF
WNSVRHARPL SIGLNCALGP DLLRQYVEEL SNKAEVFISA HPNAGLPNAF GEYDMDGAEM
AKHIGEWARA GLLNIVGGCC GTSPSHIAAI AKAVEGVAPR VPPVLEPAMR LSGLEPFNVG
KDSLFVNVGE RTNVTGSKAF ARMILEGRYD DALSVARQQV ENGAQVIDIN MDEGMLDAEA
AMVRFLHLIA SEPDIARVPI MIDSSKWNVI EAGLKCIQGK GIVNSISMKE GEAEFIERAK
LCLRYGAAVI VMAFDETGQA DTYARKTEIC TRAYKLLTET VGFPAEDIIF DPNIFAVATG
IEEHANYAVD FIEATRWIRQ NLPYAHVSGG VSNVSFSFRG NDAVREAIHT AFLYHAIQAG
MDMGIVNAGQ LGVYENLDPE LKERVEDVLL NRRADATERL VAFAEGVKGG AKEKVEDLAW
RSLPVNERLT HALVQGITQY IVEDTEAARL EAERPLHVIE GPLMAGMNVV GDLFGAGKMF
LPQVVKSARV MKQAVAHLIP YIEADKRAGD SQSAGKIVMA TVKGDVHDIG KNIVGVVLGC
NGYEIVDLGV MVPAQKILDA AREHKADIIG LSGLITPSLE EMAHVAKEMQ RQGFTIPLLI
GGATTSLAHT AVKIEPNYEH PVVYVKDASR AVGVCTQLLS GELRDAFAAE VRADYAQTRA
RHLKHKSDTA RLTLADARAN KFGIDWASYT PPVPNQPGVH VLKAYDLAKL VETIDWTPFF
ASWELHGKYP KILDDEVVGA EATKLFSDAQ AMLNRMVAEN WVEARAVFGL FPANAVDDDI
EVYADESRSQ ALTTWHNLRQ QAKKPEGRAN LCLADFVAPK ASGLKDYLGA FVVTAGIGED
ERAKAFEAAH DDYSAILFKS LCDRLAEAFA EHLHLRVRRE FWGYAADEAL PNDDLIAEKY
RGIRPAPGYP ACPEHSEKAA LFGLLDATNA IGVELTENFA MWPGAAVSGF YLSHPDSQYF
AVAKIERDQV EDYARRKGWD VKTAERWLGP NLGYQPE
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