Gene Tbd_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0232 
Symbol 
ID3671374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp254089 
End bp254646 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content62% 
IMG OID637708893 
Producthypothetical protein 
Protein accessionYP_313990 
Protein GI74316250 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.714493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG ACAGCCCCGA CCTCGTCGAG CGCGAACTCG ACAGCGAAAC GGTATTCAAG 
GGGCGCTTGA TGCACGTCAA GCGCGACCGT GTGCAGCTCC CCGACGGCAA GGAATCGACG
CGCGAATACA TCGTCCACCC CGGTGCCGTC GTCGTGATCC CCGTGTTCGA CAATGGCGAC
CTCCTGCTCG AACGCCAATT TCGTTACCCG CTCCGCCGCG ACTTCATCGA GCTGCCCGCC
GGCAAGATCG ACCCGGGCGA GGACGACCTC ACCTGCGCCA AACGCGAACT CGAAGAGGAA
ACCGGTTACA CCGCGTCCGA GTGGCGCGAG GTTACGACCA TCTACCCGTG CATCGGTTAT
TCGGATGAGC GCCTTGCGTT CTACCTGGCG GAAGGGCTGC GGGACGGCAC CCACGGCCGT
GACCACGACG AATTCCTCGA AGTGTTCCGC CTGCCTTTCG CCGAAGCGAT GCAGTGGGTG
AGGGACGGTC GCATCTGCGA GACCAAGACC GTGATCGGGT TGTTCTGGCT GGAGAAGATG
CTGGAGCAGG GATGGTAA
 
Protein sequence
MENDSPDLVE RELDSETVFK GRLMHVKRDR VQLPDGKEST REYIVHPGAV VVIPVFDNGD 
LLLERQFRYP LRRDFIELPA GKIDPGEDDL TCAKRELEEE TGYTASEWRE VTTIYPCIGY
SDERLAFYLA EGLRDGTHGR DHDEFLEVFR LPFAEAMQWV RDGRICETKT VIGLFWLEKM
LEQGW