Gene Tbd_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0230 
Symbol 
ID3671372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp252040 
End bp253116 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content68% 
IMG OID637708891 
Producttwo-component system sensor ATPase 
Protein accessionYP_313988 
Protein GI74316248 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.779882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAGAA GGAATCATAA CAACCGCGAG GTCGAACTGC CGAACTTCTG CCGCCTCGGG 
GTCAGCCTGC GGATCGCACT GACCGCCGAA GCGGCGCTGG CCGCGAGCGT CGCAGCACGG
GCCGCCGACG CCGCGGCCTT CGCCGCCGAA TTCGTCGCGC TCTCGGCCTT CGCCCAGCCG
GCACTGCTGC TTGCGCTGCT TGCGCTGTGT GGCGCCGGAC GCGGGCTGCG CAGCCAGCCC
TATCGGCGTG GCGTCGTGAT GGCGCTCGGA CTCGGCGCCG CGGTGCCTTT CCTGGTCGCG
CTGTGGCTCG CACCGATACT CGCGGGGTCG GTACCCGTCT CGCCGCTCGG TGTCCTCGTG
TTTGCGCTGG GGGTCGGCGG GGGGCTGCTT GGCTATTTCA ACCTGCGCGC CCGCGCGCTG
TCGCCCGCAG TCACCGAGGC GCGGCTGCAG GCGCTGCAGG CGAGGATCCG CCCGCATTTC
CTGTTCAACA GCCTCAATGC AGTGCTCGCG CTCGTCCGCA AGGACCCGCG GCGCGCAGAG
CATGCGCTCG AAAACATGGC CGACCTGTTC CGCGCCTTGA TGGGCAACGC GCGCCAGCTC
GCGCCGCTCG AGGACGAGGT CGCGCTCACG CGTGCCTATC TCGAACTCGA ACAGTTGCGC
CTCGGCGACC GCCTGCGCGT GGTCTGGCAC ACCGGGAAGA TGCCGGCGGA CGCACTGATT
CCGCCGCTGG TCATCCAGCC CCTGGTCGAG AACGCGGTGT ATCACGGCAT CGAGCCGCTC
GCCGACGGCG GCGAAATCAG CCTCAATCTT TACCGCAGCG CCGACAAGGT CCACGTCGTC
GTGCGCAACC CGATCGCCTC CGACGGTAGC CATCACCGCG GCAATCGCAT CGCGCTCGCC
AACATCCGCG AGCGCCTGCT GCTGCACTTC GACCTCGATG CCCAACTCAA GTTGAAGCCG
CTCGGCTCCG TTTATCAGGT ACACATCGTC ATCCCCTATA CCCGTGAACG GACCCAACCC
GCCACTTCGC GTCCTCATCG TCGACGACGA GGCGCCGGCA CGCGCGCGGC TCGGTGA
 
Protein sequence
MKRRNHNNRE VELPNFCRLG VSLRIALTAE AALAASVAAR AADAAAFAAE FVALSAFAQP 
ALLLALLALC GAGRGLRSQP YRRGVVMALG LGAAVPFLVA LWLAPILAGS VPVSPLGVLV
FALGVGGGLL GYFNLRARAL SPAVTEARLQ ALQARIRPHF LFNSLNAVLA LVRKDPRRAE
HALENMADLF RALMGNARQL APLEDEVALT RAYLELEQLR LGDRLRVVWH TGKMPADALI
PPLVIQPLVE NAVYHGIEPL ADGGEISLNL YRSADKVHVV VRNPIASDGS HHRGNRIALA
NIRERLLLHF DLDAQLKLKP LGSVYQVHIV IPYTRERTQP ATSRPHRRRR GAGTRAAR