Gene Tbd_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0228 
Symbol 
ID3671370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp250056 
End bp250634 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content67% 
IMG OID637708889 
ProductMarR family transcriptional regulator 
Protein accessionYP_313986 
Protein GI74316246 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.209959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAGCC AGGCGCTCAC CCTGTTCGAT CTGGTCGAGC GGCTCTCGCT GCTGACCCGT 
GCCGATCTCC GGCAGGCCGG GGCGGCACAG GGGCTGCAGC CCGTGCACCT GCAGGTGTTG
TTCTATCTGA ATCAGGCCAA CCGTTTCAGC AACACGCCGC AAGCGCTCAC CGAGTATCTC
GGCCTGACCA AGGGCACTGT GTCGCAAACC CTTCTGGTAC TCGCTCGGCG CCGGCTCATC
TCCCGTTACG CCGATCCCCG CGACGGCCGC GTGGTCCGCC TGATCCTGAC CGAGGGCGGC
ACGACCCTGC TGAAGACGCT CAGTGCCGGG AGCGCCTGGC GCGACATCGT CCAGACCGCA
AGCCCCGCGC GCGTCAGCTC GGCGATGGTC GTGCTGCGTC AGGTGCTGTC GCAGGTGCAG
GCGCAGAGCG GCAAGCGCAC CTTCGGTCTA TGCGGAAGCT GCCGCTACAA CCGGCGGCTC
GGGCCGCGCA GCTATTTTTG CGAACTGATG CAGGAAAAAC TCGGCAGCCC CGAGGTGCGG
CGGATCTGCC GCGAGCACGC GCCGCCGCCA GCCGATTAA
 
Protein sequence
MKSQALTLFD LVERLSLLTR ADLRQAGAAQ GLQPVHLQVL FYLNQANRFS NTPQALTEYL 
GLTKGTVSQT LLVLARRRLI SRYADPRDGR VVRLILTEGG TTLLKTLSAG SAWRDIVQTA
SPARVSSAMV VLRQVLSQVQ AQSGKRTFGL CGSCRYNRRL GPRSYFCELM QEKLGSPEVR
RICREHAPPP AD