Gene Tbd_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0221 
Symbol 
ID3671363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp244278 
End bp245309 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content66% 
IMG OID637708882 
Productquinolinate synthetase 
Protein accessionYP_313979 
Protein GI74316239 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0379] Quinolinate synthase 
TIGRFAM ID[TIGR00550] quinolinate synthetase complex, A subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.071665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGAGG AAGTGCTAGA CGCCGAAGAG CGCGCCTCGC TCAAGACCCG CATCAAGACG 
CTGATGAAGG AGCAGGATGC GGTGCTCGTC GCCCACTACT ACACCTCGGC CGACCTCCAG
GATCTGGCCG AGGAAACCGG CGGCTGCGTC TCCGATTCGC TCGAGATGGC GCGCTTCGGC
CACGCCCACC CGGCGCGCAC GCTGACCGTC GCGGGCGTGA AATTCATGGG CGAGACGGCG
AAGATCCTCA ACCCCGAGAA GCGCGTCCTG ATGCCCGATC TCGGCGCCGA ATGCTCGCTC
GACCTCGCCT GTCCGGCCGA CGAATTCACG GCCTTCTGCG ACGCCCACCC CGATCGTCTC
TCGGTCGTCT ACGCCAACAC CAGCGCCGAA GTCAAAGCGC GTGCCGACTG GGTCGTGACC
TCTGGTATCG CGGTCAAGAT CGTGAAATAC CTGCACCAGC AGGGCCACAA ACTCTTGTGG
GCGCCCGACC GCCACCTCGG CGAATACGTG CGTCGCGTCA GCGGCGCGGA CATGATCCTG
TGGCAGGGCT CATGCGTCGT GCACGAGGCC TTCAAAGCCG AGGCCCTCAA ATCGCTGCAC
GCGGCGCACC CGGCGGCCGC GGTACTCGTG CATCCGGAGT CGCCCGAGTC GGTGATCGCG
CTGGCCGACA TCGTCGGCTC GACCACGCAG TTGATCGAAG CGGTGCGCAC GCTACCCAAC
CCCGAATTCA TCGTCGCGAC CGACAACGGC ATCTTTCACA AGATGCACGC GGCCGCGCCC
GGAAAGACGC TGATCGAGGC GCCCACGGCC GGCGAAGGCG CGACCTGCGT CTCGTGCGCG
CACTGCCCGT GGATGGCGAT GAACGGCCTG CGAAAACTCG CCGCCGTGCT CGAATCCGCG
GCAGTCGGCA AGCGCAGCGC CAACGAGATC CACGTCGAAG AATCGGTCGG CCAGCGCGCG
CGGCGCTCGA TCCAGAAAAT GCTGGACTTC GCCGCGGCCG AAAAAGCCGG CCGCATCCAG
CTCGGCGACT GA
 
Protein sequence
MVEEVLDAEE RASLKTRIKT LMKEQDAVLV AHYYTSADLQ DLAEETGGCV SDSLEMARFG 
HAHPARTLTV AGVKFMGETA KILNPEKRVL MPDLGAECSL DLACPADEFT AFCDAHPDRL
SVVYANTSAE VKARADWVVT SGIAVKIVKY LHQQGHKLLW APDRHLGEYV RRVSGADMIL
WQGSCVVHEA FKAEALKSLH AAHPAAAVLV HPESPESVIA LADIVGSTTQ LIEAVRTLPN
PEFIVATDNG IFHKMHAAAP GKTLIEAPTA GEGATCVSCA HCPWMAMNGL RKLAAVLESA
AVGKRSANEI HVEESVGQRA RRSIQKMLDF AAAEKAGRIQ LGD