Gene Tbd_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0208 
Symbol 
ID3673654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp226352 
End bp228673 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content67% 
IMG OID637708869 
Producthypothetical protein 
Protein accessionYP_313966 
Protein GI74316226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.228151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG TAGCCGAAGG CACTCGCGTA CGCCTGCCTC TGCTGCTTCT GGCGCTCGCC 
TATACGCTTT TCGTCGTCTA CGGGAGTCTC GTCCCGCTCG AATTCCGGCC GCTGTCGTGG
GACACGGCGG TGGCCCGGTT CGGCGCCATG CCCTTCCTCA AGCTGGGCAT CGGCTCGCGC
GCCGACTGGA TGGCGAACCT CCTGCTGTTC ATTCCCCTGA CCTTCGTCTG GATGGGCGTG
CTGTCACCAT CCGGCACCCT GCTCGGGCGG CTGGCTGCGA CGCTCGTGCT GATTCCGCTC
GCGACGGCTT TGAGTCTTGG CATCGAATTC GTCCAGCTGT TTTTCCCCCA GCGTACGGTG
TCGCAGAACG ACGTCTTCGC CGAGACACTG GGCGGCGTGC TGGGCGTCGC GCTGTGGTGG
GTCGCCGGCG CGCGGTTCTC GGCATGGCTG CAAGGCTGGC GAGCGCAGCA TTCCCGGGCC
GCGCTGGCAG AGCGGATTGC CTGGACCTAT TTCGCCGGCG TGCTGGTTTA CAACGTGCTG
CCGCTCGACC TGACGATCAG TGCGGTCGAG ATCTTTCACA AATGGCAGGA TGGTCGGGTC
AATCTCATTC CCTTTGCGCG CCTGCCGGCC GACCCGTTCT ACGCGGTCTA CGAAATCGCG
ACCGACGCCT TGCTCTGGGT CCCGCTTGCA CTGCTGTGGC GGCTCGACGG AAAGCGCGGG
CCCTGGCGCG CCTGGGGCAT GACGCTCGTG ACCGCGGCCA CGCTCGAAGT GTTGCAGCTC
TTCGTCTTTT CGCGCGTCAG CGACATCACC GATCTCTTCA CCGCGGCAGC CGGCGCGGCC
CTGGGCACGG GGATCGGAAG CCGCGTGCGC GGCCGCGGCG CGCACGCGGA GGGCTTGACG
CGCGACCGGG GCACGTCATG GGCAATGCGG CGGTGGGCGC CTTTCGTGTT GACCGCACTG
TGGATGGCCG CGCTCGCCCT CGTGTTCTGG TTCCCGTTCG ACTTCCGGAC CGACGGCGCG
TTTGTCCGCA CCCGCCTCGA CTTCGTCCTG CGCGTGCCCT TCGAGGTCTA TTACTTCGGC
ACCGAGTACC GCGCGATCAC CGAGGTCTTG CGCAAGACGC TGTTCTTCGC CCCGCTGGGC
GCATTGCTCG CGTGGGGCGT CGCAGTCCAG CCGTGGCGCC TGCGCGCACC CTTGTTCGTG
CTCGCACTGC TGCTTCTGGC CGCCGTGCCG GCAGTCATCG AATTCGGGCA GGTGATGCTG
CCGCACAAGA TTGCCGATAC GACGGACTGG TTCCTCGCGT GGGCCGGTGG TCTGGCCGGT
TACGCGCTGG CCCGCCGGTT TGCCCGCGCG CCGCGCGTCG TGGCCGCGCC GCATGTCTCG
CGGGGCGAGG AAGCGCACAC GAATCCGGCG AGCCAGCCGG TCGGCTGGCA TTTCGTGTTC
TCGACCGCCG GCCTCGCACT GCTCCTGTGG CTACTCGGCC AGGCCGCCTT CGTGCCGTAC
AACGTGCGCG AGCTGTTGCA ACACGATAGC CCGGTACTCT CGGCGCTGCT TCTCGCGGTC
GCCTGCTACT GGCTCGCGGT CTGGCCCCTG TGGCTCGCAC GCCGCCGCGT CTCGGCGCTT
GCGCGTCTGC TTCAGTTGCC GTTCGGCTTG TTCGTCTACG GGCTCGTCGC CTTTCTGCTG
CTGCGCTTCG CCGTTCCGGA GGAGAGCCTG CACGATCTGG TCGGAAGCCC GATTCTCGGG
TGGGGCCAGT GGGAAACCGG CGTCCGATGG ATTGCGCTCG CAAGCGTGCC CGGTGCCATG
CTGTATCTCG CCGCGCAGAG CATTCGGCGC TGGCGGGGGC GGACGCTCGG CGCAATCCAT
TTCTGCGCCG TGCTCCCGGT GCTGGCCATC GCCTACTGGG CTGTCGTTCA CCGTGCCGCC
ACCGACAACC TCGTCGAACT CATCGCCACG CCGCGGCCAC TCGCTTTCGC CGCACTTTGC
GGCGCGCTCT GGCTGCTGTT TTTCGCGGCC GCGTCGGTCG CATCGCCGCA GTCCGCGTCC
ATGCGCTTCG GCAGGCCCAT CGTGGTGGCG CTTTCGCTGC CGCTCGCCGC GTTACTGGTC
CATTTCGGTC TCGCCGACGA GATCGACAAG TATGGTCAAC GGTTCTCTGC GCTGCAGTTC
CTGTTAAGCG CGGACCGTCA AAATTACGCG GCGCCGGCCT ACATCTGGTT GCGCTATGCG
GGCGTGCATG TGCTTGTCAT CGCCGGGCTT GCGTTCATAC AATGGCCGCA CTTCAGAACC
GCCCGACGAA CTCACGCCCA AGGCTCCGAT GTCCCTTATT GA
 
Protein sequence
MTGVAEGTRV RLPLLLLALA YTLFVVYGSL VPLEFRPLSW DTAVARFGAM PFLKLGIGSR 
ADWMANLLLF IPLTFVWMGV LSPSGTLLGR LAATLVLIPL ATALSLGIEF VQLFFPQRTV
SQNDVFAETL GGVLGVALWW VAGARFSAWL QGWRAQHSRA ALAERIAWTY FAGVLVYNVL
PLDLTISAVE IFHKWQDGRV NLIPFARLPA DPFYAVYEIA TDALLWVPLA LLWRLDGKRG
PWRAWGMTLV TAATLEVLQL FVFSRVSDIT DLFTAAAGAA LGTGIGSRVR GRGAHAEGLT
RDRGTSWAMR RWAPFVLTAL WMAALALVFW FPFDFRTDGA FVRTRLDFVL RVPFEVYYFG
TEYRAITEVL RKTLFFAPLG ALLAWGVAVQ PWRLRAPLFV LALLLLAAVP AVIEFGQVML
PHKIADTTDW FLAWAGGLAG YALARRFARA PRVVAAPHVS RGEEAHTNPA SQPVGWHFVF
STAGLALLLW LLGQAAFVPY NVRELLQHDS PVLSALLLAV ACYWLAVWPL WLARRRVSAL
ARLLQLPFGL FVYGLVAFLL LRFAVPEESL HDLVGSPILG WGQWETGVRW IALASVPGAM
LYLAAQSIRR WRGRTLGAIH FCAVLPVLAI AYWAVVHRAA TDNLVELIAT PRPLAFAALC
GALWLLFFAA ASVASPQSAS MRFGRPIVVA LSLPLAALLV HFGLADEIDK YGQRFSALQF
LLSADRQNYA APAYIWLRYA GVHVLVIAGL AFIQWPHFRT ARRTHAQGSD VPY