| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0203 |
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| Symbol | |
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| ID | 3673649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 221566 |
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| End bp | 222141 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637708864 |
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| Product | type IV pilus assembly protein PilN |
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| Protein accession | YP_313961 |
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| Protein GI | 74316221 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.412927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA TCAATCTCCT CCCCCACCGC GAAATCGCGC GCGCCGCGCG GCGGCGCCAG
TTCAACGTCC TGCTCGGCCT GGCCGTCGCG GCAGGCGTGG TCGCGGTCAT CCTCGGTCAC
AGCGTGATCG CGGCGCGGCA GTCCGCTCAG GAAGCCCGCA ACGCCTTCCT CGAACAGGAA
ATCGCCAAGC TCGACAGCCA GATCGGGGAA ATCAAGAAGA TCCGTGAGCA GACGCAGGCC
TTGCTGGAGC GCAAACAGGT CGTCGAGACG CTGCAGTCCA ACCGCACCGA AGTGGTTCAC
CTCTTCGACC AGATGATCCG GCTCCTGCCC GAAGGTCTTT ATCTGAAATC GTTCAAGCAA
GTGGGCGACA CGGTCACGAT CGACGGCTAC ACGCAGTCGA GCGCGCGCGT CTCGACACTG
ATGCGCAATC TCGACGATTC GCCCTGGTTC GAATCGGCCG GGCTGGTCGA GATCAAGGCA
GCGACCGTGA ACAATCTGCG CGCCAATGAA TTCGTTCTGA CGGTGAAGCA ATCGAGGCAG
CAGGCCGACG CTGCGACCGA AGGGGGCAAG GCATGA
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| Protein sequence | MIRINLLPHR EIARAARRRQ FNVLLGLAVA AGVVAVILGH SVIAARQSAQ EARNAFLEQE
IAKLDSQIGE IKKIREQTQA LLERKQVVET LQSNRTEVVH LFDQMIRLLP EGLYLKSFKQ
VGDTVTIDGY TQSSARVSTL MRNLDDSPWF ESAGLVEIKA ATVNNLRANE FVLTVKQSRQ
QADAATEGGK A
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