Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0201 |
Symbol | |
ID | 3673647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 217797 |
End bp | 220178 |
Gene Length | 2382 bp |
Protein Length | 793 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637708862 |
Product | peptidoglycan glycosyltransferase |
Protein accession | YP_313959 |
Protein GI | 74316219 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.558494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCCA GATGGTGGCA TTACGCATTG GCGCTGGTCG TGAGCCTCGG CGTCGTCGGC ACTGCGCTCG CCGGCCTCGC GGCCGCCCTG ATCTACCCCA ACCTGCCGCC GCTCGAGGCG TTGACCGACT ACAAGCCCAA GCTGCCACTG CGCGTCTACA CCGCGGACGG CGCGCTGATC AGCGAATTCG GCGAGGAGCG GCGCGCGTTC ATCGCGATCG ACAAGGTTCC GCGCTACATG AAACAGGCGA TCATCGCGGC CGAAGACGAG CGCTTCTACA GCCACGGTGG TGTCGACACC CTTGGCGTGC TGCGCGCTGC GGGCGCGAAT TTGGTGTCGG GCGGGGCAAA GGAAGGCGCG TCGACGATCA CGATGCAGGT CGCGCGCAAC TTCTTCCTGT CGAACGAGAA GACCCTGAGC CGGAAACTGT CCGAGGCGAT GCTCGCGATG AAGATCGAGC ACAGCCTTTC AAAGGACAAG ATACTCGAGC TCTACATCAA CCAGATCTAC CTCGGGCAGC GTGCCTACGG CTTCGAAGCC GCAGCCCGCG CCTATTTCGG CAAGCCGATG AAGGAACTCA CGCTCGCCGA GTTCGCCATG CTCGCCGGCC TGCCGAAGGC GCCATCACGC TACAACCCGG TCGTCAATTT TCCGCGCGCG AAGGCACGAC AGGAGTATGT GCTCGGGCGC ATGCTCAAGC TCGGGTTCAT CGACCGGCCG ACCTGGCAGG CGGCGGTCGG ACAAAAGCTC GTCATCCGTG AGGCACGCCA GCACGCGGAC GTTGTGGCAG ACTACGCCGC CGAAATGGTG CGCCAGATCC TGTTCGAAAA ATACGGGGAA GCGATCTACA GCTCCGGCTA CAAGGTGGTG ACCACGTTGC GCCGCAGCCA GCAGAACAGC GGGAACCTCG CCGTCTGGCG CGGCATCGCC GACTATGACC AGCGCCACGG CTACCGCGGG CCCGAAAAGC AGATTCGCCT GCCTGCCGAC AGGGCGGAAC GCGACAGCGC GATCGCCACG GCCCTCGCCG ACCTCGCGCC GGTCGGCGGC ATGCTGCCGG CCGTCGTCAC GCGTGCCGAC AAGAAATCCA TTCACGCGCA GCTGGCGGAC GGCACGGTTG CCGAGATCTC CGGCAAGTCG CTCAAGTGGG TGGACAACTG GGCCACCGCC AAGAAAGGGC GAAAGCTCGA GCCCGGCGCG ATCGTCCGCG TCCAGACCGG CGCCGGCAAG GAGCGCTGGC GCCTCGCCCA GCTGCCCGAG GTCGAGGCGG CCCTGGTCGC GCTCGACCCC AACAGCGGCG CGATCACCGC ACTGGTGGGC GGCTTCGACT TCAACCGAAA CAAGTTCAAC CGCGTGACGC AGGCGTGGCG GCAACCTGGG TCGAGCTTCA AGCCCTTCAT CTATTCGGCG GCCCTGGAAA AGGGCTACAC CCCGGCGACC ATCCTCGACG ACGCACCATT GATACTCGCC GCCGAAGAGG CGGGCGGCAC GGCGTGGGAG CCACGCAACT ACGACGGCAG CAGCAGCGGG CCCGTGCGCA TGCGCACCGC GCTCACCAAA TCGCTCAATC TGGTGTCGAT CCGCATTCTG CAAGGCATCG GCCCGCACTA TGCACGCGAC TACATCCGCC GCTTCGGCTT CGACCCGGCG CGTCACCCGC CCTATCTGAC GATGGCGCTC GGCGCCGGCA GCGTCACGCC GCTGCAACTC GCCTCGGCCT ACGGCGTCTT CGCCAACGGC GGTTTCGGGG TCAAGCCCTA CCTCATCGAC AAGGTCTTCG ACAAGGACGG CCGCCTGCTG ATGCAGGCCA GCGCGCAAAA GGCCGGCGTC AACGCGCCCC GCGTCATCGA CCCGCGCAAC GCCTGGCTGA TGACGAACAT GATGCAGGAC GTCGTGCGTT ACGGCACCGC GGCGCGCGCC TCGCAGCTCA AGCGCAGCGA CATCGCCGGC AAGACGGGCA CGACCAACGA TGCGCGCGAC ACCTGGTTCG CCGGCTACAC CCCGGACCTC GTCGCGGTCG CTTGGATGGG TTACGACCAG CCCCGCTCGA TGGGCCGGCG GGAGACCGGC GCGCAGTCGG CCTTGCCGGT CTGGATGAGC TTCATGGGGA CGGCGCTCAA GGGCATTCCG CAAAAAGGCT GGGCGATGCC CGCCGGCCTC GTCAGCGTGG AAATCGATCC GGTGACGGGC GCGCGCGCGT CCGGATCGGC GATCGACGAA TTTTTCGGCG ATCTGTTCGG CACCGAAGCG GAGTCCATCG TCGAACATTT CTATCAGGAG TTTCCGCCGC CCGACCGCGC CGCGCCGCCG ACCGACCTGC TCGAAGCGCC CACGGAGACG CCCTCCGACC CGGACGCACC ACCTCCCGGG ATACCGCAGT GA
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Protein sequence | MFSRWWHYAL ALVVSLGVVG TALAGLAAAL IYPNLPPLEA LTDYKPKLPL RVYTADGALI SEFGEERRAF IAIDKVPRYM KQAIIAAEDE RFYSHGGVDT LGVLRAAGAN LVSGGAKEGA STITMQVARN FFLSNEKTLS RKLSEAMLAM KIEHSLSKDK ILELYINQIY LGQRAYGFEA AARAYFGKPM KELTLAEFAM LAGLPKAPSR YNPVVNFPRA KARQEYVLGR MLKLGFIDRP TWQAAVGQKL VIREARQHAD VVADYAAEMV RQILFEKYGE AIYSSGYKVV TTLRRSQQNS GNLAVWRGIA DYDQRHGYRG PEKQIRLPAD RAERDSAIAT ALADLAPVGG MLPAVVTRAD KKSIHAQLAD GTVAEISGKS LKWVDNWATA KKGRKLEPGA IVRVQTGAGK ERWRLAQLPE VEAALVALDP NSGAITALVG GFDFNRNKFN RVTQAWRQPG SSFKPFIYSA ALEKGYTPAT ILDDAPLILA AEEAGGTAWE PRNYDGSSSG PVRMRTALTK SLNLVSIRIL QGIGPHYARD YIRRFGFDPA RHPPYLTMAL GAGSVTPLQL ASAYGVFANG GFGVKPYLID KVFDKDGRLL MQASAQKAGV NAPRVIDPRN AWLMTNMMQD VVRYGTAARA SQLKRSDIAG KTGTTNDARD TWFAGYTPDL VAVAWMGYDQ PRSMGRRETG AQSALPVWMS FMGTALKGIP QKGWAMPAGL VSVEIDPVTG ARASGSAIDE FFGDLFGTEA ESIVEHFYQE FPPPDRAAPP TDLLEAPTET PSDPDAPPPG IPQ
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