| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0186 |
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| Symbol | |
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| ID | 3673632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 198000 |
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| End bp | 200012 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637708847 |
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| Product | cytochrome c-type biogenesis protein |
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| Protein accession | YP_313944 |
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| Protein GI | 74316204 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.229857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.30032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG CTTCCCATTC CTTCGGCAAG GCCTCGTTCG AATTGCTCAG CTCGATGCGC
TTCGCCATCA GCCTGCTCTC CATCCTCGCG GTGGCGTCGA TCGTCGGCAC GGTGCTCAAG
CAGGCCGAGC CTTACAGCAA TTACCTGATC CAGTTCGGGC CGTTCTGGTT CGAGGTCTAC
AAGAAACTCG GGCTCTACGA CGTCTATCAC GCAGGCTGGT TTCTCGTCAT TCTGACCTTC
CTCGTCGTCT CGACCAGCGT CTGCATCTGG CGCAACGCGC CGAATTTCGT GCGCGAGATG
AGGACTTTCC GGGAACACGT CAGCGAGCAA TCGCTCGCCG CTTTCAAGCA CAAGCACGAG
CGCGCGACGA GCGAGTCGCC GGAAGCGCTC GCCGCGAGCG CCCAGCGCTA TCTCGAAAGC
CGTCGTTACC GGGTCAAGAC GCTGCAGCGC GAAGACGGCG TGCTGCTCGC CGCCAAGGCC
GGAAGCTGGA ACCGGCTCGG CTACCTGCTC GCGCATTCGG CGATCGTGAT GATCTGCATC
GGCGGGCTCA TCGACGGCAA CCTCGTCTTC AAGGCGCAGC AACTGCTGGG CCTCAAAAAG
ATCGAGACGC GCGACATTCC GCAGAGCCAG GTGCCGGCGA TCTCGCGCCT GACGCCGGCC
AATCTGTCGT TTCGAGGCAG CGTGCAGATT CCCGAGGGCT CGAGTGCGGA TATCGCATTC
CTCAATGTCG CCGACGGCTA CCTGGTGCAG GATTTGCCGT TCACGGTCGC GCTCAAGGAA
TTTCGCATCG AGCATTACAG CAACGGCCAG CCGAAGAGCT TCGAGAGTGA CGTCGAGATT
TTTGACCACG CGGGCAACAA ACTCCGCGAA GCGACGATCG CCGTCAACCA TCCGCTGATC
CACGACGGCA TCGCGATCTA TCAGGCGAGC TTTGCCGACG GCGGCACGCG GCTGCAATTG
CGCGGATGGA ACCTGTTCGC GCCGACGGCC GAATCCTTCC CGGTGCAGGG CACCGTATAC
CAGAATGCGA CGCTGGCGAG CGACGGCGGC AACTACACGC TCGAGTTCGT CGACTTCCGC
CCCTTCAATA TCGAAAACCT CGGCGGCGAG ACAACGACCC CGCGGGACAC CATGAGCGTC
CTCGGCGGAA GCCCGGTCGC CGACGACACG GGGCTTCACA ACGTCGGCCC GAGCTTCCAG
TACAAGGTGC GCGACGCCCG CGGCCAGGCC CGGGAATACT CCAACTACAT GCTGCCGCTG
GAACTCGACG GACGCTGGTA TTTGATGTCG GGCGTGCGCG AATCGCCGAA CGAAGCCTTC
CGCTACCTGC GCATGCCGCT CGATCCCGAA GGCAAGATCG AGACCTTCAT GCGCCTGCGC
GGCGCATTGC TCGATCCCGC CCAGCACCCG GCGATCACGG CCGCATTTGC GCGCCAGGCC
CTGCCGCAGG AAGCCTGGGG TACCGAGATC GAGGACAAGC TCAAGCTCAG CGCAACGCAG
GTTCTCGGGC TGTTTGCGCA AGGCGGCTTC CAGTCGCTCG GGAGCTTCAT CGAAAGCCGC
GTCCCCGAAG CCGAACGCGA AAAGGCCGCC GGCACCTATC TGCGCATCCT CGAACTGGCG
GCCTTCGAGG CGTTGAAGAT TTCCAACCGC CAGAACGGCC TTGCGGCACC CCAGGCGGAC
GAGGCGGCCG GCTGGCTGGT GCGCGACACG CTCAACAGCA TGAGCGACAT CTTCGTCTAC
GGTGCGCCGG TGTACCTGCA ACTGATGCAA TACGACGAGG TCAAGGCCAG CGGGCTGCAA
CTCACGCGCT CGCCCGGCAA GAACATCGTC TACCTCGGTT CGCTTTTGCT GACGCTCGGC
GTATTCTTCA TGCTCTACGT CCGCGAACGC CGCGTCTGGC TGCGCATCAA ACCCGGGCAC
GCACTACTCG CGATGTCGTC TGCCAAGCAC ACCATCGATT TCGAGACGGA ATTCGCCGAA
CACGCCCGCG CGCTGGACGC GCTCGCCAAA TAG
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| Protein sequence | MHTASHSFGK ASFELLSSMR FAISLLSILA VASIVGTVLK QAEPYSNYLI QFGPFWFEVY
KKLGLYDVYH AGWFLVILTF LVVSTSVCIW RNAPNFVREM RTFREHVSEQ SLAAFKHKHE
RATSESPEAL AASAQRYLES RRYRVKTLQR EDGVLLAAKA GSWNRLGYLL AHSAIVMICI
GGLIDGNLVF KAQQLLGLKK IETRDIPQSQ VPAISRLTPA NLSFRGSVQI PEGSSADIAF
LNVADGYLVQ DLPFTVALKE FRIEHYSNGQ PKSFESDVEI FDHAGNKLRE ATIAVNHPLI
HDGIAIYQAS FADGGTRLQL RGWNLFAPTA ESFPVQGTVY QNATLASDGG NYTLEFVDFR
PFNIENLGGE TTTPRDTMSV LGGSPVADDT GLHNVGPSFQ YKVRDARGQA REYSNYMLPL
ELDGRWYLMS GVRESPNEAF RYLRMPLDPE GKIETFMRLR GALLDPAQHP AITAAFARQA
LPQEAWGTEI EDKLKLSATQ VLGLFAQGGF QSLGSFIESR VPEAEREKAA GTYLRILELA
AFEALKISNR QNGLAAPQAD EAAGWLVRDT LNSMSDIFVY GAPVYLQLMQ YDEVKASGLQ
LTRSPGKNIV YLGSLLLTLG VFFMLYVRER RVWLRIKPGH ALLAMSSAKH TIDFETEFAE
HARALDALAK
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