Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0185 |
Symbol | |
ID | 3673631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 196827 |
End bp | 197966 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637708846 |
Product | putative transmembrane cytochrome C-type biogenesis transmembrane protein |
Protein accession | YP_313943 |
Protein GI | 74316203 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.107492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.161414 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG CTCTCAACCA TCCCGCCCCG CTTTTCAAGC GCCTTGCCTG GTTCGACTGG CTGTTCGCCG CCATCGTCGC CGCCGGCGGC CTGTTCGCGC TCTCGCGCTT CGGCGAATAC ATGGACATCT ACGAGAAAGG CATCCTGCTG GCGTCGATCC CGGCACTCGC GGTGTTCGGT TGGTTCTGGA AGCCCTTCCG CCCGCTCTTC ATCGTCGTCG GCGCACTCAG TCTTTTCGCG ATCAGCCAAT ATCAGGGCGA ACTCGGGCGC ATGGAGGAGG CCTTCTTCCT CAAGTACCTG ATCTCCAGCC AGGCCGCGAT CATGTGGATG TGCGCGCTGT TCGGTCTCGC CACCGTCGCC TACTGGGGCG GCATGCTCGC GCGTTCCGAA TTCACGATGA AGACCGGCAG CAGCCTGACC TGGGCCGCGA TCACGCTCGG CTACGTCGGT CTCATGGTGC GCTGGTACGA GTCCTATCTG ATCGGCACCG ACATCGGGCA CATCCCGGTT TCCAATCTCT ACGAAGTATT CGTCCTGTTC TGCCTGATCA CGGCGATGAT GTACCTCTAC TACGAAGCCC GCTATCAGAC GCGGACCATG GGCGCCTTCG TCCTGCTCGT GATCTCGGCC GCGGTCGGCT TCATCCTCTG GTACACGCTC GACCGCGGTG CACATGAAAT CCAGCCGCTG GTGCCCGCGC TCAAGTCGTG GTGGATGAAG CTGCACGTCC CCGCGAACTT CATCGGCTAC GGCGCATTTT CGATCGCGGC GATGCTCGGC GCGGCATATC TTCTCGCCGC ACGCGGCATT CTCGCGACCC GCCTGCCACG GCTTGAGGTG ATCGACGACG TCATGTACAA GGCCATCGCG ATCGGCTTCG CCTTCTTCAC GATCGCGACC ATCCTCGGCG CGATGTGGGC GGCCGAGGCT TGGGGTGGCT ACTGGTCGTG GGACCCGAAG GAGACCTGGG CGCTGATCGT GTGGCTGAAC TACGCAGCCT GGCTGCACAT CCGCCTGGTC AAGGGCCTGC GCGGGCCGAT GCTCGCCTGG TGGGCGCTGG TCGGACTCTT CGTGACGACC TTCGCGTTCC TCGGCGTGAA CATGTTCCTC TCCGGCCTGC ACTCCTACGG CGAACTCTGA
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Protein sequence | MELALNHPAP LFKRLAWFDW LFAAIVAAGG LFALSRFGEY MDIYEKGILL ASIPALAVFG WFWKPFRPLF IVVGALSLFA ISQYQGELGR MEEAFFLKYL ISSQAAIMWM CALFGLATVA YWGGMLARSE FTMKTGSSLT WAAITLGYVG LMVRWYESYL IGTDIGHIPV SNLYEVFVLF CLITAMMYLY YEARYQTRTM GAFVLLVISA AVGFILWYTL DRGAHEIQPL VPALKSWWMK LHVPANFIGY GAFSIAAMLG AAYLLAARGI LATRLPRLEV IDDVMYKAIA IGFAFFTIAT ILGAMWAAEA WGGYWSWDPK ETWALIVWLN YAAWLHIRLV KGLRGPMLAW WALVGLFVTT FAFLGVNMFL SGLHSYGEL
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