Gene Tbd_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0170 
Symbol 
ID3673616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp183821 
End bp184285 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content71% 
IMG OID637708831 
Productouter membrane lipoprotein, putative 
Protein accessionYP_313928 
Protein GI74316188 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0832777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCGT CGTCTCGCAA GCTGATGGTC CTGTCGCTCC TGCCGCTCGT ATTGGTGCTC 
GGCGGATGCC CGGCGGGCAC GGGCGGCAAG GATTACAGCC GCGGTCAGGC GCGGAACGTG
CAGGAAGTGC AGATGGGCGT CGTCGAATCG GTGCGCATGG TCTCGATCGA AGGCACGAAG
TCGCCGGTCG GCGCGGGGGC CGGCGCGGTC GTCGGCGGCG TCGCCGGCAG TTCGGTCGGC
GGCGGGCGCG GCAGCGTGGT TGGTGCGACG GTCGGCGCAG TGCTCGGCGG CCTCGGCGGC
GCGGCGGCCG AGGAGGCCGT CACCCGCGAC CAGGGCATCG AGATCACCGT GAAGCTCGAT
TCGGGACGAC TGATCGCCGT CACCCAGGCC GCCGACGAGG AATTCCGCGT CGGCGACCGC
GTGCGCGTAC TTTCTGGCGG CGGGGTGAGC CGCGTGTCGC ACTGA
 
Protein sequence
MFSSSRKLMV LSLLPLVLVL GGCPAGTGGK DYSRGQARNV QEVQMGVVES VRMVSIEGTK 
SPVGAGAGAV VGGVAGSSVG GGRGSVVGAT VGAVLGGLGG AAAEEAVTRD QGIEITVKLD
SGRLIAVTQA ADEEFRVGDR VRVLSGGGVS RVSH