Gene Tbd_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0160 
SymbolcbbG 
ID3673606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp172476 
End bp173477 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content63% 
IMG OID637708821 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_313918 
Protein GI74316178 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.258287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTATCA AAGTAGGTAT CAACGGTTTT GGCCGCATCG GCCGCATGGC TTTCCGCGCG 
ATCGCCAAGG ACTTCCCGGA CATCGAAGTG GTCGCGATCA ACGACCTGCT CGATCCCGAG
TACCTGGCCT ACATGCTGAA ATACGATTCG GTGCACGGCA ACTTCAAGGG CGACATCGCC
GTCGAAGGCA ACAACCTCAT CGTCAACGGC AAGAAGATCC GCCTGACCGC CGAGCGCGAG
CCCGCCAACC TGAAGTGGAA CGAAGTCGGC GCCGAGCTGG TGATCGAGTG CACGGGCTTC
TTCCTGACCA AGGAAACCTG CCAGAAGCAC ATCGACGCCG GCGCCAAGAA AGTCGTGCAG
TCCGCGCCTT CCAAGGACGA CACCCCGATG TTCGTATACG GCGTGAACCA CGAGAAGTAC
GCCGGCGAGG CCATCGTCTC GGCCGCTTCG TGCACGACCA ACTGCCTCGC GCCGATCGCC
AAGGTGCTGA ACGACAACTG GGGCATCAAG CGCGGCCTGA TGAGCACCGT GCACGCCGCC
ACCGCGACCC AGAAGACCGT CGACGGCCCG TCGTCCAAGG ACTGGCGCGG CGGCCGCGGC
ATCCTCGAAA ACATCATCCC GTCCTCGACC GGCGCCGCCA AGGCCGTCGG CGTGGTGTTG
CCTGAGCTGA AGGGCAAGCT GACCGGCATG GCGTTCCGCG TTCCGACCTC CGACGTCTCG
GTCGTCGACC TGACCGTCGA GCTCGAGAAG CCCGCCAAGT ACGCGGACAT CTGCGCCGCG
ATGAAGAAGG CTTCGCAGTC GGGCGACATC AGCAAGACCC TCGGCTACAC CGACGAGAAA
GTCGTTTCGA CCGACTTCCG CGGCAACGGC TTCTCGTCGA TCTTCGACGC CGAAGCCGGC
ATCGCGCTCG ACGACACCTT CGTCAAGGTC GTGTCGTGGT ACGACAACGA GTACGGCTAC
ACCTGCAACA TGCTGCGCTT CGTGCAGCAC GTCGCGAAGT AA
 
Protein sequence
MAIKVGINGF GRIGRMAFRA IAKDFPDIEV VAINDLLDPE YLAYMLKYDS VHGNFKGDIA 
VEGNNLIVNG KKIRLTAERE PANLKWNEVG AELVIECTGF FLTKETCQKH IDAGAKKVVQ
SAPSKDDTPM FVYGVNHEKY AGEAIVSAAS CTTNCLAPIA KVLNDNWGIK RGLMSTVHAA
TATQKTVDGP SSKDWRGGRG ILENIIPSST GAAKAVGVVL PELKGKLTGM AFRVPTSDVS
VVDLTVELEK PAKYADICAA MKKASQSGDI SKTLGYTDEK VVSTDFRGNG FSSIFDAEAG
IALDDTFVKV VSWYDNEYGY TCNMLRFVQH VAK