| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0143 |
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| Symbol | |
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| ID | 3673287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 151456 |
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| End bp | 154527 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637708803 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_313901 |
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| Protein GI | 74316161 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.609125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA CCTTGACCGA GTTCGCGCTC GCGCGCCGCT GGCTCATCCT CGTTCTCGCG
CTCGCGCTGG CGGGCTTCGG CGTGCGGGCG TTCCAGCAGC TTCCGATCGA CGCCTTTCCC
GACGTGTCGA CGACGCAGGT CAAACTGATT CTCAAGGCGC CGGGCATGAC GCCGGAGGAA
GTCGAAGCCC GCATCGCCCA GCCGGTCGAG ACCGAGCTGC TCGGGATTCC GCACCAGACG
GTGTTGCGCA GCCTGTCGAA GAATGCGCTC GTCGACATCA CGGTCGATTT CGAGGAAGGC
ACCGACATCT ATTGGGCGCG GCAGCAGGTC AGCGAACGCT TCGCCAACGC CAAGAGCGAT
CTGCCCGACA ACGTCAGCGG CGGGCTCGCG CCGATCTCGA CGCCGCTCTC CGAGCTTTTC
ATGTTCACGG TCGAGGGGCC GTTGTCGCTC GCCGAGAAGC GCACCCTGCT CGACTGGACG
ATTCGTCCGC AACTGCGCGC GCTGCCCGGC GTCGCCGACG TCAACGCGCT CGGCGGCCGC
GTCGCGACCT TCGCGGTCAG CCCCGACCCG GTCGCGCTCG CCGCGCGCGG CGTGACGCTC
GGCGAGTTGC GCGCAGCGCT CGAGGCCAAT ACCCGCAAGG CCGGCGCGGG CCGCGTCAAC
GAGGGCGAGG AGACCTGGGT CGTGCGCGTC GACGCCGGCG TCGCGTCGCT CGACAGCCTG
CGCCGCATCG GCGTCAAGGC GGTCGGTCCG ACGGTCGTCA CCGTCGGCGA CGTCGCCAGC
GTGGAAATGG GCGAGTTGAC GCGCTATGGC GCCGTCACGC AGAACGGGCG GGGCGAGGCC
GTCGAAGGTC TCGTGATCGG CCTCAAAGGC GTCAACGCCG GGCTGCTGAT CGAGAACGTC
AAGGCCAGGC TCGCCGAGAT CGAAGCGACG CTGCCGAAAG GCGTGAGCCT CTCGCCGTTC
TACGACCGCG CGCAGCTCGT CGACCGCGCG GTCGGCACGG TCAGCACGGC GCTGCTCGAA
GCCGCGGTGC TCGTCGTCGT CCTGCTGCTG CTGTTTCTCG GCAACCTCAG GGCCGCGGTC
GTGGTCGCGC TGATCCTCCC GCTGTCGGTG CTCGCGACGT TCGTGCTGAT GCGCCAGTTC
GGGCTTTCGG CCAACCTGAT GAGCCTCGGC GGACTCGCGA TCGCGATCGG CCTTCTGGTC
GACGCCGCCG TCGTCGTCGT CGAGAACGTC GTCGCGCATC TCGCGCACGA CGCGGAGACC
ACGGGCGGGA CGCGGCAGCA GCGGGTGCTC TGGGCGGTGC AGGAAGTCTC GGTGCCGGTC
GCCTCCGGCA TCGCGATCAT CGCGATCGTC TTCCTGCCGC TGCTGACGCT CGAAGGACTC
GAGGGCAAGC TCTTCGCGCC GGTCGCGCTG ACGATCGTGT TCGCGCTGGC CGCGTCGCTG
CTGCTCGCGC TGACCGCGAT CCCGGTGCTC GCCTCGGTGC TGCTGAAGCG CGCGGCGCAT
GAGGATCCCT GGCTCCTGCG ACGCGCGCGC GCGCTCTACG AGCCGCTGCT CGACCGTTCG
CTGGCACGGC CGAAACGCGT CTACGCGGCC GCAGCGCTAC TGATGGTCGC GGCTGTCGCC
GTCTACCCGA CGATCGGCAA GACCTTCATG CCGGTCATGG ATGAAGGCGA CATCCTCGTG
CAGCTCGAGA AGCTGCCGTC GATCAGCCTC GAGGCCGCGG TCGCGCAGGA CCTGCGCGTG
CAGCAGGCCC TGCTCAAGAA CGTGCCCGAG ATCCGCCGCA TCGTCGCGCG CGCCGGCGCC
GATGAGCTCG GCCTCGACCC GATGAGCCTC AACGACACCG ATTCCTTCCT CGTACTGAAG
CCGGTGAGCG AATGGCGCAA GCGTGACAAG GCTTGGCTCA CCGACGAAAT CCGCAAGGTC
GTCGACGGCT TTCCCGGCAT TGCCTACAAC TTCACCCAGC CGATCGACAT GCGCGTATCC
GAGATGCTCA CGGGATCGCG CGGCGACGTC GCGATCAAGA TCTTCGGCCC CGACCTCGCG
ACGCTCAACC GGCTCGCCGC GCAGATCTTC CAGGTGGTCG AGAAGGTTCC GGGCGCGTCC
GATGTCTACA CGCCGCAGAA CGCGGGCGTC CAGTATCTGC AGGCCGAGAT CGATCGCGAC
GCCGCGGCGC GCTTCGGCCT TTCCGCGGAC GAGGTCGGTC TGCTGCTGCG CACCCAGCTC
GAAGGCGAGG TGATCGGCAC GATCCAGCAG CAGGGACGGC GTGTTCCGCT GCAGCTGCGT
GGGCCACAGG CCCTGCGCGA GTCGCCCGAC GCGCTGCAGG CGATCCGCTT GACGCTTGCG
GACGGCCGCG AGATCAGTCT CGACCAGGTC GTGCGGCTCA AGCGCACGAC CGGGCCGGTC
GCGGTGAAGC GCGAGAACGC GGCGCGTTTC ACGGTCGTGC AGAGCAACGT CGCCGGCCGC
GACCTCGTGA GCTTCGTCGG CGACGCGCAG CGGGCCGTCG CGCGCGAGGT CAAGCTCCCG
CCGGGCTACC ACCTCGCCTG GGGCGGCCAG TTCGAAAACC AGCAGCGTGC GGCCGAGCGC
CTGATGATCG TCGTGCCGGT GGCGCTGCTG CTGATCGGAT TTCTGCTCTA TGTCACCTTC
GGCAATGCCG CGCAGGCGCT GCTCGTGATG ATGAACGTGC CGCTTGCGCT GATCGGTGGG
ATCTTCGCGC TCGCGGCCTC GGGCGAGTAT CTGTCCGTGC CGGCGTCGGT CGGGTTCATC
GCGCTGCTCG GCATCGCGGT GCTCAACGGT GTCGTGCTGG TCAGCCATTT CAACCAGTTG
CGCGCGCAGG GAATCAAGGG CGACGCCGTC GTGCGCGAGG GTGCGCTGCG CCGCCTGCGC
CCGGTGCTGA TGACGGCGAG CATCGCGGCC TTCGGCCTGG TGCCGCTGCT GTTCGCGACC
GGCCCGGGTT CCGAGATCCA GCGGCCGCTC GCCATCGTCG TCATCGGCGG TTTGGTCAGC
GCGACCCTGC TTACACTCGT GATGCTCCCA TTGCTGTATC GCCAATTCAT TCTCAAAGGA
GCGCGCGCAT GA
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| Protein sequence | MLDTLTEFAL ARRWLILVLA LALAGFGVRA FQQLPIDAFP DVSTTQVKLI LKAPGMTPEE
VEARIAQPVE TELLGIPHQT VLRSLSKNAL VDITVDFEEG TDIYWARQQV SERFANAKSD
LPDNVSGGLA PISTPLSELF MFTVEGPLSL AEKRTLLDWT IRPQLRALPG VADVNALGGR
VATFAVSPDP VALAARGVTL GELRAALEAN TRKAGAGRVN EGEETWVVRV DAGVASLDSL
RRIGVKAVGP TVVTVGDVAS VEMGELTRYG AVTQNGRGEA VEGLVIGLKG VNAGLLIENV
KARLAEIEAT LPKGVSLSPF YDRAQLVDRA VGTVSTALLE AAVLVVVLLL LFLGNLRAAV
VVALILPLSV LATFVLMRQF GLSANLMSLG GLAIAIGLLV DAAVVVVENV VAHLAHDAET
TGGTRQQRVL WAVQEVSVPV ASGIAIIAIV FLPLLTLEGL EGKLFAPVAL TIVFALAASL
LLALTAIPVL ASVLLKRAAH EDPWLLRRAR ALYEPLLDRS LARPKRVYAA AALLMVAAVA
VYPTIGKTFM PVMDEGDILV QLEKLPSISL EAAVAQDLRV QQALLKNVPE IRRIVARAGA
DELGLDPMSL NDTDSFLVLK PVSEWRKRDK AWLTDEIRKV VDGFPGIAYN FTQPIDMRVS
EMLTGSRGDV AIKIFGPDLA TLNRLAAQIF QVVEKVPGAS DVYTPQNAGV QYLQAEIDRD
AAARFGLSAD EVGLLLRTQL EGEVIGTIQQ QGRRVPLQLR GPQALRESPD ALQAIRLTLA
DGREISLDQV VRLKRTTGPV AVKRENAARF TVVQSNVAGR DLVSFVGDAQ RAVAREVKLP
PGYHLAWGGQ FENQQRAAER LMIVVPVALL LIGFLLYVTF GNAAQALLVM MNVPLALIGG
IFALAASGEY LSVPASVGFI ALLGIAVLNG VVLVSHFNQL RAQGIKGDAV VREGALRRLR
PVLMTASIAA FGLVPLLFAT GPGSEIQRPL AIVVIGGLVS ATLLTLVMLP LLYRQFILKG
ARA
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