| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0120 |
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| Symbol | murC |
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| ID | 3673899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 128556 |
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| End bp | 129947 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637708780 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_313878 |
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| Protein GI | 74316138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0146201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATG CCGTCAAGCA CATCCATTTC ATCGGCATCG GCGGTGTCGG CATGAGCGGG
ATCGCCGAAG TGCTGCTGAA TCTGGGTTAT GCGGTGTCCG GCTCCGACCT CGCCGACAAC
GCGGTGACGC AGCGCCTCGC GAAACTCGGT GCCCGCATCC ACCGCGGTCA TGCGCCGTCG
AATATCGCTG GCGCCGATGC GGTCGTGACC TCGACCGCGG TGCAGGAATC GAACCCCGAA
GTCGTCGCGG CGCGCGAGAA GAAGATCCCG ATCGTGCCGC GCGCGCTGAT GCTCGCCGAA
CTGATGCGCC TGCGCCAGGG CATCGCGATC GCCGGGACCC ACGGCAAGAC CACGACGACG
AGCCTCGTCG CGAGCATCCT CGGCGAGGCG GGCATGGACC CGACCTACGT CATCGGCGGC
AAGCTCACGG CCGCCGGCAC CAACGCGCGC CTCGGGCAGG GCGACTTCCT GGTCGCCGAG
GCCGACGAGT CCGACGCGTC CTTCCTCTAT CTCACGCCCG TGATCGCGAT CGTCACCAAC
ATCGACGCCG ATCACATGGA CACCTACGGC CATGATTTCG ATCGCCTCAA AACGGCCTTC
GTCGACTTCT GCCAGCGCCT GCCCTTCTAT GGCATGGCGG TGCTGTGCAT CGACGACGCC
AACGTGCGCG AAATCCTGCC GCGCATCACC AAGCCGATCA CGACCTACGG CTTCGACCCG
GCGGCGCAGG TGCGCGCGGT CGACACGCGC TTCGAGCACG GCCAGATGCG CTTCACCGTC
AAGCGCGAGG GCATGGCCGA CCTCGACGTG ACGCTCAACC AGCCGGGGCT GCACAACGTG
CTGAACGCGC TCGCCGCGAT CGCGGTCGCG ACCGAAGTCG GCGCGAGCGA CGCCGCGATC
GTCAAGGCGC TCGCCGAATT CCACGGCGTC GGCCGGCGCT TCCAGCGCTA CGGCGAACAC
CCGACGAAAG ACGGCGGCTG CTACTGGCTG ATCGACGACT ACGGACACCA TCCGGTCGAA
ATGGCCGCGA CGCTCGCTGC GGCGCGCGGA GCGTTTCCGG GACGACGTCT CGTGCTCGTG
TTCCAGCCCC ACCGGTACTC ACGCACCCGC GACTGCTTCG AGGATTTCGT CAAGGTCCTG
TCGGAGACCG ACGCGCTGGT GCTGACCGAG GTCTATCCGG CCGGCGAGGC GCCGATCGTC
GCCGCCGACG GCCGCGCCCT CGCGCGCGCG GTGCGGGTCG CCGGCAAGGT CGAGCCGGTG
TTCGTCGAGA ACGTCGCCGA TGTCGCCGCA ACCGTGCGCG ACCTCGTGCA GGCGGACGAT
GTCGTGCTGG TGATGGGCGC GGGCAGCATC GGCCAGGTCG CGCCCGCGCT TGGAGAACGC
GATGCGCCAT GA
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| Protein sequence | MKHAVKHIHF IGIGGVGMSG IAEVLLNLGY AVSGSDLADN AVTQRLAKLG ARIHRGHAPS
NIAGADAVVT STAVQESNPE VVAAREKKIP IVPRALMLAE LMRLRQGIAI AGTHGKTTTT
SLVASILGEA GMDPTYVIGG KLTAAGTNAR LGQGDFLVAE ADESDASFLY LTPVIAIVTN
IDADHMDTYG HDFDRLKTAF VDFCQRLPFY GMAVLCIDDA NVREILPRIT KPITTYGFDP
AAQVRAVDTR FEHGQMRFTV KREGMADLDV TLNQPGLHNV LNALAAIAVA TEVGASDAAI
VKALAEFHGV GRRFQRYGEH PTKDGGCYWL IDDYGHHPVE MAATLAAARG AFPGRRLVLV
FQPHRYSRTR DCFEDFVKVL SETDALVLTE VYPAGEAPIV AADGRALARA VRVAGKVEPV
FVENVADVAA TVRDLVQADD VVLVMGAGSI GQVAPALGER DAP
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