| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0119 |
|---|
| Symbol | |
|---|
| ID | 3673898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 127459 |
|---|
| End bp | 128559 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637708779 |
|---|
| Product | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase |
|---|
| Protein accession | YP_313877 |
|---|
| Protein GI | 74316137 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
|---|
| TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0295321 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG CGAACCGCAC CCTCATGGTC ATGGCCGGCG GCACGGGCGG CCACGTCTAC
CCTGCGCTCG CCGTTGCCGA GACCTTGCGC GAGCGCGGCT GGAGCGTGTT CTGGCTCGGC
ACGCGCGCCG GGCTCGAGGC GCGTGTGGTC CCGGCCGCGG GAATCGACAT GGTCTGGGTC
TCGATGGGCG GCGTGCGCGG CAAGGGTCTC GTGAAGAAGC TGCTGCTGCC GGCGATGCTG
CTCGTCGCAT TCGCCCAGAG CCTCGGCGCG ATCCTGCGCC GGCGCCCCGA CGTCGTGCTC
GGCATGGGCG GCTACACGGC CTTTCCGGGC GGCATGATGG CGAGCCTGTT GAACCGGCCG
CTCGTCGTGC ACGAACAGAA TTCCGTCGGC GGGTTGACCA ACCGCCTGCT GGCCTGCCTG
GCCGACCGTG TGCTGACCGC ATTCCCCGCG GTATTCACCC ATGCCCACGA CAAGCCGATT
CCGTGCCGGC GCGTGTCGGC CGAATGGGTC GGTAACCCGG TGCGCGGCGA CATCACGGCC
GCGCCGGCCG GGGAACGCGC GGCGCGCAGC GGCCCGCTGC GCCTGCTCGT CGTCGGCGGG
AGCCTCGGCG CGAGCGCGCT GAACGAGCTG GTGCCGCGCG CGCTGGCGCT GCTGCCCGAG
GCGCAGCGGC CGCGCGTCGT GCACCAGTCA GGACGCCGCC ACGTCGACGC GCTGCGCGCC
GGCTATGCCG CGGCCGCCGT CGACGCCGAG GTGCGCGACT ACATCGACGA CATGGCTGCG
GCCTACCGTG ACTGCGACTT CGCGATCTGC CGCGCCGGCG CCATGACCGT CGCCGAACTC
GCGTGCGCGG GCGTGCCGGC GCTGCTCGTG CCCTTCCCGT TCGCGGTCGA CGACCACCAG
ACCGGCAACG CGGCCTTCCT GGCCGAGGCC GGCGCGGCCT GGCTCGTGCA GCAGAAGGAC
CTGAGCGCCG AAGCGCTGGC TGAATTGATC GCCGGCATCG ACCGCAACCG GCTCGCGGCG
ATGTCCGAGC AGGCCGTGCG GCTCGCCAAG CCCGATGCGA CCGGGCGCGT CGCCGACATC
TGCGAGGCCC TCGCGAAATG A
|
|---|
| Protein sequence | MAAANRTLMV MAGGTGGHVY PALAVAETLR ERGWSVFWLG TRAGLEARVV PAAGIDMVWV
SMGGVRGKGL VKKLLLPAML LVAFAQSLGA ILRRRPDVVL GMGGYTAFPG GMMASLLNRP
LVVHEQNSVG GLTNRLLACL ADRVLTAFPA VFTHAHDKPI PCRRVSAEWV GNPVRGDITA
APAGERAARS GPLRLLVVGG SLGASALNEL VPRALALLPE AQRPRVVHQS GRRHVDALRA
GYAAAAVDAE VRDYIDDMAA AYRDCDFAIC RAGAMTVAEL ACAGVPALLV PFPFAVDDHQ
TGNAAFLAEA GAAWLVQQKD LSAEALAELI AGIDRNRLAA MSEQAVRLAK PDATGRVADI
CEALAK
|
|---|
| |