Gene Tbd_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0111 
Symbol 
ID3673890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp117689 
End bp118624 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID637708771 
Productmethyltransferase 
Protein accessionYP_313869 
Protein GI74316129 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0275] Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 
TIGRFAM ID[TIGR00006] S-adenosyl-methyltransferase MraW 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0724488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG CCCATGTGCC GGTGCTGGCA CAGGAGGCGG TGGCAGCGCT GGCGATCAAG 
CCCGAGGGCG TCTACGTCGA CGCGACCTTC GGCCGCGGCG GCCACAGCCG CATGATCCTC
GCGCGCCTCG GGACGCTCGG GCGGCTCGTC GCCCTCGACC GCGATCCCGC GGCGATCGCC
GCCGGCGCCG CCCTCGACGA CCCGCGGCTG ACCCTGCGGC AAAGCGAATT TTCGCGCCTT
GGCAAGGTGC TCGACGCGCT CGGGATTGCG CGGGTCGACG GGATCCTGCT CGATATCGGC
GTGTCGTCGC CGCAACTCGA CGACGCGGCG CGCGGATTCA GCTTCCGTTT CGACGCGCCG
CTCGACATGC GCATGGATCC CGGCAGCGGT ATCTCCGCGG CCGACTGGCT GGCGACGGCG
GAGGAGGAAG AAATCAGTGA AGTCATCCGC ACCTACGGGG AAGAGCGGTT TGCTAAGCCG
ATTGCGCGTG CGCTTGTTGC AGCACGGCAA AAAGAAGCGA TCACTAGCAC GGCCCAGCTC
GCGGGCATCA TCGCCGCGGC AGTCAAGAAA CGCGAGCCGG GGCAGCATCC GGCGACGCGC
AGCTTCCAGG CTATACGGAT TTATCTCAAT CGCGAACTTG AGGAACTGAA GGCTGTGCTC
CCGCAATGCG TCGAGCGGCT GCGTGCCGGC GGGCGTCTCG CCGTGATCAG CTTCCATTCG
CTCGAAGACC GCATCGTCAA ACGCTTCCTG CGCACCGAGT CGCTCGGCGA GCAGGCGCCG
CCGCGCCTGC CGATTCCCGC CGCGATGCTC AAGGCCGGCC GCCTGAGGCT GGTCGGACGC
GCGCAGCACG CGAGCGACGC CGAGGTCGCG GCCAACCCGC GGGCGCGCAG CGCGGTGCTG
CGAGTCGCCG AACGCGTCGC CGAGGCGGGC GCATGA
 
Protein sequence
MEPAHVPVLA QEAVAALAIK PEGVYVDATF GRGGHSRMIL ARLGTLGRLV ALDRDPAAIA 
AGAALDDPRL TLRQSEFSRL GKVLDALGIA RVDGILLDIG VSSPQLDDAA RGFSFRFDAP
LDMRMDPGSG ISAADWLATA EEEEISEVIR TYGEERFAKP IARALVAARQ KEAITSTAQL
AGIIAAAVKK REPGQHPATR SFQAIRIYLN RELEELKAVL PQCVERLRAG GRLAVISFHS
LEDRIVKRFL RTESLGEQAP PRLPIPAAML KAGRLRLVGR AQHASDAEVA ANPRARSAVL
RVAERVAEAG A