Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0107 |
Symbol | |
ID | 3673885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 113626 |
End bp | 114219 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637708767 |
Product | phosphoheptose isomerase |
Protein accession | YP_313865 |
Protein GI | 74316125 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | [TIGR00441] phosphoheptose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0339734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTAC ACGACAGAAT CGTCGGCCAT TTCCAGGCGT CGGCGCAGAG CAAGCTCGAC GCTGCCGACG CGCTCGCGCC CCGCATCGAA CAAGGCGCGC GCTTGCTCGT GCACAGCCTT GCGCAAGGCG GGAAGATTCT CGCCTGCGGC AACGGCGGAT CGGCCGCCGA CGCGCAGCAT TTCGCTTCCG AGATGCTCAA CCGCTTCGAG CAGGAGCGCC CCGGGCTCGC GGCGCTCGCG CTCACGACCG ACACGTCGAC GCTGACCTCG ATCGCCAACG ACTACGCCTA CGACCAGGTG TTCGCGCGCC AAGTCAAGGC GCTCGGCCAG CCCGGCGACG TGCTGCTGGC GATCTCGACG AGCGGCAACT CCGCCAACGT GCTGCAGGCC GTCGCCGCCG CTCACGCCCG CAGCATGCAG GTCATCGCGC TGACAGGTCG CAGCGGGGGC GGTCTCGCCG AGCAGATCGA CGACGGCGAC GTCTGCATCT GCGTGCCGGC CGAGTCCACT GCACGCATCC AGGAAATCCA TCTGCTGACC ATCCATTGCC TCTGCGATGC GGTGGACAGC CTTTTATTAG GAGTCGAAGA ATGA
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Protein sequence | MPLHDRIVGH FQASAQSKLD AADALAPRIE QGARLLVHSL AQGGKILACG NGGSAADAQH FASEMLNRFE QERPGLAALA LTTDTSTLTS IANDYAYDQV FARQVKALGQ PGDVLLAIST SGNSANVLQA VAAAHARSMQ VIALTGRSGG GLAEQIDDGD VCICVPAEST ARIQEIHLLT IHCLCDAVDS LLLGVEE
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