Gene Tbd_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0107 
Symbol 
ID3673885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp113626 
End bp114219 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID637708767 
Productphosphoheptose isomerase 
Protein accessionYP_313865 
Protein GI74316125 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0339734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTAC ACGACAGAAT CGTCGGCCAT TTCCAGGCGT CGGCGCAGAG CAAGCTCGAC 
GCTGCCGACG CGCTCGCGCC CCGCATCGAA CAAGGCGCGC GCTTGCTCGT GCACAGCCTT
GCGCAAGGCG GGAAGATTCT CGCCTGCGGC AACGGCGGAT CGGCCGCCGA CGCGCAGCAT
TTCGCTTCCG AGATGCTCAA CCGCTTCGAG CAGGAGCGCC CCGGGCTCGC GGCGCTCGCG
CTCACGACCG ACACGTCGAC GCTGACCTCG ATCGCCAACG ACTACGCCTA CGACCAGGTG
TTCGCGCGCC AAGTCAAGGC GCTCGGCCAG CCCGGCGACG TGCTGCTGGC GATCTCGACG
AGCGGCAACT CCGCCAACGT GCTGCAGGCC GTCGCCGCCG CTCACGCCCG CAGCATGCAG
GTCATCGCGC TGACAGGTCG CAGCGGGGGC GGTCTCGCCG AGCAGATCGA CGACGGCGAC
GTCTGCATCT GCGTGCCGGC CGAGTCCACT GCACGCATCC AGGAAATCCA TCTGCTGACC
ATCCATTGCC TCTGCGATGC GGTGGACAGC CTTTTATTAG GAGTCGAAGA ATGA
 
Protein sequence
MPLHDRIVGH FQASAQSKLD AADALAPRIE QGARLLVHSL AQGGKILACG NGGSAADAQH 
FASEMLNRFE QERPGLAALA LTTDTSTLTS IANDYAYDQV FARQVKALGQ PGDVLLAIST
SGNSANVLQA VAAAHARSMQ VIALTGRSGG GLAEQIDDGD VCICVPAEST ARIQEIHLLT
IHCLCDAVDS LLLGVEE