| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0104 |
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| Symbol | |
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| ID | 3673882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 111108 |
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| End bp | 112571 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637708764 |
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| Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
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| Protein accession | YP_313862 |
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| Protein GI | 74316122 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.226437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0216284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTATC ACGACCTCCG AGACTTCGTC GCACAGCTCG AAAAAATGGG CGAGCTCAAG
CGCATCGCCA CCGAAGTCGA TCCCCGCCTC GAAATGACCG AGATCGCCGA CCGCGTGCTG
CGTGCCGGCG GCCCGGCCCT GCTGTTCGAG CATCCGAAGG GGCACCGCGT GCCCGTGCTC
GCGAACCTGT TCGGCACGGT CAAGCGCGTG GCGCTCGGCA TGGGCGAGGA CGATCCGGCG
CGGCTGCGCG AGGTTGGCAA GCTGCTCGCT TACCTGAAGG AGCCCGAGCC GCCGAAGGGG
CTGCGCGACG CCTGGGACAA ATGGCCGGTG TTGAAGCAGG TGCTCAACAT GGCACCGAAG
GAGGTCCGCA GCGCGCCGTG CCAGGAAATG GTGTGGGAGG GCAAGGACGT CGACTTGTCG
CGCCTGCCGA TCCAGCACTG CTGGCCCGGC GACGTCGCGC CGCTGATCAC CTGGGGGCTG
ACAGTCACGC GCGGCCCGCA CAAGAAGCGG CAGAACCTCG GCATCTACCG GCAGCAGGTG
ATCGGACCGA ACAAGCTCAT CATGCGCTGG CTCGCGCACC GCGGCGGCGC GCTGGACTTC
CGTGAGCATC AGCAGGCGCA TCCCGGCGAG GCCTTTCCGG TCGCCGTCGC GCTCGGTGCC
GACCCGGCGA CGATCCTCGG CGCGGTGACG CCGGTGCCGG ACACCCTCTC GGAATACCAG
TTCGCGGGGC TCCTGCGCGG CGCTAAGACC GAGGTCGTGC GCTGCCTCGG CAATACGCTG
CAGGTGCCGG CATCGAGCGA GATCGTGCTC GAAGGCGTGA TCCATCCCGA AGAGACCGCC
TTGGAAGGTC CGTACGGCGA CCACACCGGC TACTACAACG AGCAGGAGAC CTTCCCGGTC
TTCACGGTCG AGCGCATCAC GATGCGGCGC GATCCGATCT ACCACAGCAC CTACACCGGC
AAGCCGCCCG ACGAGCCGGC GATCCTCGGC GTCGCGCTCA ACGAGGTCTT CGTGCCGCTC
TTGCAGAAGC AGTTTCCCGA GATCGTCGAT TTCTACCTGC CGCCCGAGGG CTGCTCGTAC
CGGATGGCGG TCGTGTCGAT GAAGAAGGCC TATCCGGGCC ACGCCAAGCG CGTGATGTTC
GGCGTCTGGT CCTTCCTGCG CCAGTTCATG TACACCAAGT TCATCCTCGT CACCGACGAC
GACGTCGACG TGCGCGACTG GAAGGAAGTC ATGTGGGCGC TGACGACGCG CGTCGACCCC
GCGCGCGACA CGCTGCTCGT CGAAAACACG CCGATCGACT ACCTCGACTT CGCCAGCCCG
GTGTCGGGGC TCGGCAGCAA GATGGGCATC GATGCGACGA ACAAATGGCC CGGCGAAACC
CAGCGCGAAT GGGGCACGCC GATCACGATG GATGCCGCGG TCAAGGCGCG CGTCGACGCG
ATCTGGCAGG ATCTCGGCCT CTAG
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| Protein sequence | MIYHDLRDFV AQLEKMGELK RIATEVDPRL EMTEIADRVL RAGGPALLFE HPKGHRVPVL
ANLFGTVKRV ALGMGEDDPA RLREVGKLLA YLKEPEPPKG LRDAWDKWPV LKQVLNMAPK
EVRSAPCQEM VWEGKDVDLS RLPIQHCWPG DVAPLITWGL TVTRGPHKKR QNLGIYRQQV
IGPNKLIMRW LAHRGGALDF REHQQAHPGE AFPVAVALGA DPATILGAVT PVPDTLSEYQ
FAGLLRGAKT EVVRCLGNTL QVPASSEIVL EGVIHPEETA LEGPYGDHTG YYNEQETFPV
FTVERITMRR DPIYHSTYTG KPPDEPAILG VALNEVFVPL LQKQFPEIVD FYLPPEGCSY
RMAVVSMKKA YPGHAKRVMF GVWSFLRQFM YTKFILVTDD DVDVRDWKEV MWALTTRVDP
ARDTLLVENT PIDYLDFASP VSGLGSKMGI DATNKWPGET QREWGTPITM DAAVKARVDA
IWQDLGL
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