| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0100 |
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| Symbol | |
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| ID | 3673878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 106695 |
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| End bp | 108335 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637708760 |
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| Product | signal transduction protein |
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| Protein accession | YP_313858 |
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| Protein GI | 74316118 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.114046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.288231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTCCCG CTGACCCGCA CCCCGCCGAA GAAACGGCGC TGGACGATCC CGGCCTGCCG
TTTCGCCAGA GCGCGCTCGA CATCCTGCTG CGCCGCATGC GCAGCGAAAG CGACTTCCCT
GCGCTGTCCG AGGCGATCGG TGCGATCAAC CGCATCGCCG CGTCGGATCG CGAGGGGGTC
AACGAGCTGT CGAACAACAT CCTCAAGGAC TTCGCGCTCA CCAACAAGCT CTTGCGGCTC
GCCAACGTCG CGTTCTACAA CCAGGTCGGC GGCGGCTCGA TCAGCACGAT CTCGCGTGCG
GTCGTGATCC TCGGTTTCGA CGCCGTGCGC TCGATCGCGC TGAGCCTCAT CCTGTTCGAC
AACCTCGAAA ACAAGGCGCA CGCACAGCAG CTCAAGGAAG AGTTCGTCAA GCTGCTCTAC
GCCGGGATGC TGGCGCGCGA AATGGCGGGC AAGGCGCAGG TGGCCGACGT CGAAGAGGCG
TTCATCGGCG CGATGCTGCA CAAGCTCGGG CGCATGCTGG CGATGTTCTA CTTTCCCGCG
GAAACCGCGC AGATCGAGGA ACGGATCGCG GCCGAGGGGC TCGGCGACAG CCGGGTGTCG
AGCGAAGTGC TCGGCGTCTC GTTCGAAAAC CTCGGCATCG GCATCGCGCG CAGCTGGGGT
TTCCCCGATC AGCTCGTGCA GAGCATGAAG AAACTTCCGG AAGGCAAGCT CAGGCGAAGC
ACCGCCGGCG CCGACCGCCT GCGCGCGCTC GCCGGGTTTT CCAATGCCTT GTGTGAAGCC
ATCCTCGACA CCCCCGACAG CGAACGCGGC AAGGCGCTGG CGAAGATCAC CGGGCGTTTC
AGCGACGTCG TGCCGATCGG CGTCGAACAA CTCGCCGAGG TGATGGAAAA GTCGATGCAC
GACTTCGCGC AATTCGCCCT CGCCGTGAAT GTGAACCTCA AGCAGAGCGA TTTCGCCCAG
CAGGCGTCGA AATGGGCCGG CGTGCGCATG CCGGCGGCGT CCACCGATCC GTCCGCCAGC
GCCGACGACC GCGCCGCGCT CGAGTCGACG ATGCTGCACG AGCACGCGCC GATACTCGAC
GACGCGTCCG CGGCCGTGCC CGAGAGTGCA CCGCGCAGCA GCGCTGAAAT CCAGGCCGCG
CTCAGCTCGG GGCTGCAGGA CGTCGGCAAT TCCCTGATCG ACGACAACGT GTCGATCAAC
GACATCCTGC GCATGATTCT CGAGGCGATG TATACCGGCA TGGGCTTCGA CCACGTCGTG
CTGTGCATCA AGGATGGGCG TCGCAATGCG ATGTGCGGCA AGTTCGGTTT CGGCGACGGC
GTGCAGGACC TGATCAGGGC CTTCGACTTT CCGCTCACGG CGCCGGCGGA CGTCTTTCTG
GTCGCCCTGC AGCAGAACGC GGACATCCTC ATTACCGACA TCGACGACGC CAAGATCGCG
ACGCGCATCC CCGCCTGGTA TCGCGCGCGC GTCGCGGCAC ACACCTTCGC GCTCTTTCCG
ATCATCGTCC GCGGCAAGGC CGTGGGGCTG ATTTACGCCG ACCGCGCGCG CCCCGGCGAC
ATCACGATCC CGGAAAAGGA ATTGTCGCTG CTGAAGTCCC TGCGCAACCA GGCCGTACTC
GCCATCCGCC AGTCGGTGTA G
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| Protein sequence | MPPADPHPAE ETALDDPGLP FRQSALDILL RRMRSESDFP ALSEAIGAIN RIAASDREGV
NELSNNILKD FALTNKLLRL ANVAFYNQVG GGSISTISRA VVILGFDAVR SIALSLILFD
NLENKAHAQQ LKEEFVKLLY AGMLAREMAG KAQVADVEEA FIGAMLHKLG RMLAMFYFPA
ETAQIEERIA AEGLGDSRVS SEVLGVSFEN LGIGIARSWG FPDQLVQSMK KLPEGKLRRS
TAGADRLRAL AGFSNALCEA ILDTPDSERG KALAKITGRF SDVVPIGVEQ LAEVMEKSMH
DFAQFALAVN VNLKQSDFAQ QASKWAGVRM PAASTDPSAS ADDRAALEST MLHEHAPILD
DASAAVPESA PRSSAEIQAA LSSGLQDVGN SLIDDNVSIN DILRMILEAM YTGMGFDHVV
LCIKDGRRNA MCGKFGFGDG VQDLIRAFDF PLTAPADVFL VALQQNADIL ITDIDDAKIA
TRIPAWYRAR VAAHTFALFP IIVRGKAVGL IYADRARPGD ITIPEKELSL LKSLRNQAVL
AIRQSV
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