| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0099 |
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| Symbol | |
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| ID | 3673877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 105540 |
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| End bp | 106568 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637708759 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_313857 |
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| Protein GI | 74316117 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.251032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCGT TCGACGCGCT CAAGGCTGAG CTCGTGGCCG AACCGAAGAC CTGGCTGGTG
ACGGGGGCCG CCGGCTTCAT CGGCAGCAAT CTCGTCGAAG CCCTGCTGAG GCTCGATCAG
CGTGTCGTCG GCCTCGACAA CTTCGCCACC GGGCACGAAA AGAACCTCGC GCAGGTGCAG
GCGAGCGTCG GCCCTGCACG CTGGGCGAAC CTGAGCTTCA AGCGCGGCGA CATCCGCGAC
CTCATCACCT GTCATGACGC CTGCAAGGGC GTCGACTACG TACTGCATCA GGCCGCCCTC
GGCTCGGTGC CGCGTTCGAT CGAGGATCCG ATCTCGACCC ACGCCGCCAA CAACACCGGC
TTTCTCAACA TGCTGGTTGC GGCGCGCGAC GCCCGGGTCA AGCGTTTCGT CTACGCCGCA
TCGAGCTCGA CCTACGGCGA CCACCCGGCG CTGCCCAAGG TCGAGGACAT CATCGGCAAG
CCGCTGTCGC CGTACGCGGT GACCAAGCTC GTGAACGAGC TCTACGCCGA CGTGTTCGGC
CGCTGCTATG GCATGGAGTC GATCGGCCTC AGATATTTCA ACATCTTCGG CCGCCGTCAG
GATCCCCAGG GCGCGTACGC CGCCGTCATC CCGAAATGGG TCGCCAGCAT GATCCACGGC
GAGCCGGTCT ACATCAACGG CGACGGCGAG ACCAGCCGCG ACTTCTGCTA CATCGACAAC
GTCATCCAGG CCAACCTGCT CGCCGCGACG AGCCCGCACG CCGACGCCGC GAACCAGGTC
TACAACATCG CGGTCGGCGA CCGCACGACG CTCAACGAAT TGTTCGAGGC GATCCGCTCG
CTGCTGGCGC CGCGCTTCCC CCATCTCGCC GACGTGAAGC CGGTCTACCG TGACTTCCGC
TCGGGCGACG TGCGTCATTC GCTTGCCGAC ATTTCCAAGG CGCGCACGCG GCTCGGCTAC
GCGCCGAGCC ATCGCATCGC AGACGGCCTC GCCGAGGCGA TGGACTGGTA CGTGCAGGAC
CTCGCCTAA
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| Protein sequence | MSAFDALKAE LVAEPKTWLV TGAAGFIGSN LVEALLRLDQ RVVGLDNFAT GHEKNLAQVQ
ASVGPARWAN LSFKRGDIRD LITCHDACKG VDYVLHQAAL GSVPRSIEDP ISTHAANNTG
FLNMLVAARD ARVKRFVYAA SSSTYGDHPA LPKVEDIIGK PLSPYAVTKL VNELYADVFG
RCYGMESIGL RYFNIFGRRQ DPQGAYAAVI PKWVASMIHG EPVYINGDGE TSRDFCYIDN
VIQANLLAAT SPHADAANQV YNIAVGDRTT LNELFEAIRS LLAPRFPHLA DVKPVYRDFR
SGDVRHSLAD ISKARTRLGY APSHRIADGL AEAMDWYVQD LA
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