Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0095 |
Symbol | |
ID | 3673873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 100853 |
End bp | 102277 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637708755 |
Product | metallo-beta-lactamase superfamily protein |
Protein accession | YP_313853 |
Protein GI | 74316113 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.04699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.438592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA CTTTTCTCGG CGCGGCCCAC GAGGTGACGG GCTCGAGCTA CCTCGTCGAG GCCGACGGCG TGCGCTTTCT GGTCGACTGC GGGATGTTCC AGGGCGGGCG CGAGGCGCGC GAAAAAAACC GCCGTCCGTT CGGCTTCGAC CCGGCGGCGC TCGACTTCGT CATCCTGACC CACGCCCACA TCGACCATTC CGGCCTGTTG CCGCGGCTGG TCGCCGACGG CTACCGCGGG CCCGTGCACG CGACCCGGGC GACCTGCGAC CTGCTCGCCG TGATGCTGCC GGATTCAGCC CACATCCAGG AAAAGGAGGC CGAGTACGCG CGCGTCGACC GCTTCGGCGA GTCGGCGAGG CGCGAGGCCA ATGGCGAGAC CGCGCGCGAC ACGGCGCCGC TGTATACGGT CGCCGAGGCG CGCGCCGCGC TCGCCCGGCT GAACGGCGTC GACTACGATC TCGAAATCGC GCCTCACCCG GCTGTGCGCT GCAAATTTCG CGACGCCGGC CACATCCTCG GCTCGGCCAT CGTCGAGCTG TGGATCGGCG AGGGCGCGAA GCGGCGCAAA CTCGTGTTTT CGGGCGATCT GGGCCAGCCG GCGCGCCCGC TGCTGCACGA CCCGACGCCG ATCACGGACG CCGACTACCT GGTGGTGGAG TCGACCTACG GCAACCGCGA TCACAAGACG ATGGCAGCGA CCGAAGACGA GCTCGTCGAG GCGATCAACG ACACGCTCGA GCGCAAGGGC GGCAACGTCG TCGTCCCCGC CTTCGCGGTC GGCCGCACGC AGGACATGCT TTATCTGTTC GCCGACCTGA GCCGCCAGGG GCGGATTCCC AAACTCACGG TGTTCGTCGA TTCGCCGATG GCGACCGCGG CGACCGAGAT CACCTTCAAG CACATGGCCT TGCTCGACGC CGAGACGCAT CGGCTCATGG GCCGCCACGG CGGCACCGCG CATTTCCGCA AGCTCGGTTT CGTCGAGGAC GTCGAGGAAT CGAAGGCGCT CGACCGCATC AAGGGCGGCG CCGTCATCGT CTCGGCGAGC GGCATGTGCG AAGCCGGGCG CATCAAGTTC CACCTGCGCG CCAACCTCGG GCGGCGCGAG TCGAGCGTGC TCATCACCGG CTTCCAGGCG GCCGGCACCT TCGGCCGCAG GCTCGTCGAC GGCGCGAAGC AGGTCCGTCT GCTCGGCGAG GACATCAAGG TGCGCGCCGA TATCTACACG CTCGGCGGCC TCTCGGCCCA CGCCGACCGC AGCGCCCTGC TCGGCTGGCT CGGGCATTTC ACCAACAAAC CGCGTCGCGT CTTCGTCGTC CACGGCGAGG AAGACGTCGC GACCGGCTTC GCCGCGACGA TCGCCACGCA GTTCGGCTGG GATGCGATCG CCCCGACCGG GGGCCGCAGC GTCGTTCTGG ACTAG
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Protein sequence | MKLTFLGAAH EVTGSSYLVE ADGVRFLVDC GMFQGGREAR EKNRRPFGFD PAALDFVILT HAHIDHSGLL PRLVADGYRG PVHATRATCD LLAVMLPDSA HIQEKEAEYA RVDRFGESAR REANGETARD TAPLYTVAEA RAALARLNGV DYDLEIAPHP AVRCKFRDAG HILGSAIVEL WIGEGAKRRK LVFSGDLGQP ARPLLHDPTP ITDADYLVVE STYGNRDHKT MAATEDELVE AINDTLERKG GNVVVPAFAV GRTQDMLYLF ADLSRQGRIP KLTVFVDSPM ATAATEITFK HMALLDAETH RLMGRHGGTA HFRKLGFVED VEESKALDRI KGGAVIVSAS GMCEAGRIKF HLRANLGRRE SSVLITGFQA AGTFGRRLVD GAKQVRLLGE DIKVRADIYT LGGLSAHADR SALLGWLGHF TNKPRRVFVV HGEEDVATGF AATIATQFGW DAIAPTGGRS VVLD
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