Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0056 |
Symbol | |
ID | 3673255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 58176 |
End bp | 59510 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637708715 |
Product | signal transduction protein |
Protein accession | YP_313814 |
Protein GI | 74316074 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.680301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.542378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGAACC GTCTTGTCGG AATGTTCTCG GGTAAGGATA GCGAGGCCGA TCCGCCGGCA CGGCCCGCGC CGGCAAAGGC GGAGACCGCG CCCGCCAGGC CGCCCTCGGT CATGCGCCGC GAGGCGATGC TGGGGCGCGA CCAGAAGGTC GCGGGCTACA CCTTCATGCT GCGGCGTTCG GCCGACGAAG AGCACGACCC GGCCCTTCCC GAGGTGCGCC GCCTCTACGA CGAGACGTTG CTCGCCAACC TGCAGGGCAT GGACGTGTCG CGCCTGCTCG GACAGCGCCA GGCCTTCATC CCGATCGTGC CGGAGACGCT CGGTCACGCC CTGATCGAGA ACTGGCCCGC CGCGGGCACC GTCTGGCTGC TCAAGCTCGA CGCCGAGACC GCCATCGACG CCGCCCTGCT CGCGCGCGTG GCCGCGCTCA AGGCGCATGG CTTCGGCTTC GCCCTCGAAT TCGAGGGGGT GACGCGGCCG GAGCGCCATG GCCTGCTGCA GCAGGCGGAC TACGTGCTGA TGGAGGTCGG CAGCGAAGAC ATCCCGGCGA TCACGGCGCA GATGGCCGCG GTCTCCAAGA TCGCCGCGGG CAAGCGCTTC GTCGCCGTCG GCGTGCAGAC GCTGGAAGCC TTCCACATGT GCCACAAGCT CCAGTTCGCG CTCTTCATGG GGCCTTTCAT CACGCGTCGT GAACACCTCG GCAACCCGGT CGTCGGGCCG TCGCGCGCGA AGGTGCTGGA CCTCATGAAC CGGGTGCGCA CCGGCGCCGA GCAGGCCGAG CTGGCCGCCC AGTTCCGCCA CGATCCCGCG CTCTCGGTGC GCCTGCTGCG CTACGTCAAT TCGCCCGGCA TGGGGCTCAT GAACAAGGTC GGCGGCATCG AACAGGCCTT GATGGTCATG GGCCACGACA AGCTCTACCG CTGGCTGACG CTGATCCTCT TCACCGGCGG CCAGGCGCAG GAACTCGACC ATGCGGTCCT CGAAAACGCC CTCGTGCGCG GTCGGGTCGC CGAACAGCTC GCCGGCCGCG CGCTGTTCGC CAAGGCGCGC GACGAAATTT TCGTCGCCGG ACTGTTCTCG CTGCTCGACG TCGTCATGCA CATGCCGATG GATCAGGTGC TCAAACAGAT CAGCCTGCCG GTCGAGATCA GCGAAGCGAT CCTCGCGCAG CGCGGGCCTT ACGCGCCGTA TGTCGCGCTC GCGATCGCCT GCGAGCAGGA CGACCAGAGC AGTATCGAGA CGCTCGCGCG CGCGGTCAAT CGCGACGTTG CCGACATCAA CCGCGTGCAC ATGGACGCGC TGTTGTGGGC GGAGCAGCTC TCGGCCGACG TATGA
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Protein sequence | MLNRLVGMFS GKDSEADPPA RPAPAKAETA PARPPSVMRR EAMLGRDQKV AGYTFMLRRS ADEEHDPALP EVRRLYDETL LANLQGMDVS RLLGQRQAFI PIVPETLGHA LIENWPAAGT VWLLKLDAET AIDAALLARV AALKAHGFGF ALEFEGVTRP ERHGLLQQAD YVLMEVGSED IPAITAQMAA VSKIAAGKRF VAVGVQTLEA FHMCHKLQFA LFMGPFITRR EHLGNPVVGP SRAKVLDLMN RVRTGAEQAE LAAQFRHDPA LSVRLLRYVN SPGMGLMNKV GGIEQALMVM GHDKLYRWLT LILFTGGQAQ ELDHAVLENA LVRGRVAEQL AGRALFAKAR DEIFVAGLFS LLDVVMHMPM DQVLKQISLP VEISEAILAQ RGPYAPYVAL AIACEQDDQS SIETLARAVN RDVADINRVH MDALLWAEQL SADV
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