Gene Tbd_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0048 
Symbol 
ID3672335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp49133 
End bp50467 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content71% 
IMG OID637708707 
Producthypothetical protein 
Protein accessionYP_313806 
Protein GI74316066 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA AAATCATCGT GCTCGACGAC GACCCGACCG GCTCGCAGAC CGTGCATTCG 
TGTCTGCTGC TGACGCGCTG GGACGTCGCC ACGCTGAAGA CGGCGCTGGC CGACGCGGCG
CCCTTGTTCT TCGTCCTGAC CAACACCCGC GGCATGGACG CGGCGCGCGC CGCAGCGGTG
ACGCGCGAGG TGTGCGTCAA CCTGAAGGCG GCGCTGGTCG ACTACACGGG CCCGGTCCTC
TTCGTGTCGC GCTCGGATTC GACGCTGCGC GGACACTACC CGGTCGAGAC CGACGTCATG
AACGAATTGC TCGGACCGTT CGACGCGACG CTGCTCACGC CCGGGTTCTT CGAGGGCGGG
CGCATCACAC GTGACAGCAC GCATTACCTG GTCGTCGACG GCCAGCCAGT GCCGACGCAC
GAAACCGAAT TCGCGCGCGA TTCGGTGTTC GGCTACACGA CGGCCTTCCT CCCTGACTAC
GTGAGCGAGA AGACCGGCGG CCGGGTCGCG GCAGAGTCCG TCGCCCGCCT GACGTTCAAG
GATCTGCGCG CAGGCCGCGC AGGCGCGTGG CTCGCCGGCC TCGAAGGCAA CGTGGTCGGC
GCGGTCGACG GCGAAACGCC GGAGGACTAT GCGCTCTTCG CCGACGCCGC GCTCAAGGCC
GCCGCGCACG GCAAGCGCCT GTTGTTTCGC AGCGCCGCGT CCCTGCTCAC CGCGCTGGCG
AAACTGCCGC CGCAGCCGGT CGCCGCCGAA TCCTTCGCGA GCCTCGTTCG CGACGGCCGC
GCGGGCGCGG TAATCGTCGG CTCCCACGTC GCGAGGGCGA CGGCGCAGCT CGGCGCCCTG
CTGCGCGAGC GCGGCGTCGT CGGCCTGCCG CTCGACGTCG CGCGGCTGCC CGAAGACCAC
GACGCGCTCG TCGATGCGCT GCGTGCCGGC GTCGCCCACG CGCACGCACA TGGCCTCACG
CCGGTCGTCT ACACGAGCCG GGGGGAACGC CAGTTCGCGA GCACCGCCGA GCGGCTCGCC
TTCGGCGCCG CGGTCTCGGC CGCCCTGATG GCTGTCGTGC GCCAACTTCC GGCGACGCTG
GGCTTTCTCG TCAGCAAGGG CGGCATCACC TCGAACGACG TGCTCTCGAC CGGCCTCGAA
CTCGCCGCGG CACGCGTGCT CGGGCAGATC CTGCCCGGCG TCACGGTGGT GCAGACGCCG
CCGTGGCATG CGGTCCCGCA ACTTCCCGTC GTCATCTTTC CGGGCAACGT CGGCGGCGAC
GACGCCCTGG CGGAGGTCTA CCGCCGCCTC GCCCCCTCGC GCGCGCAGGC GGGCCGGGCT
AAACTCGCTG CCTGA
 
Protein sequence
MKPKIIVLDD DPTGSQTVHS CLLLTRWDVA TLKTALADAA PLFFVLTNTR GMDAARAAAV 
TREVCVNLKA ALVDYTGPVL FVSRSDSTLR GHYPVETDVM NELLGPFDAT LLTPGFFEGG
RITRDSTHYL VVDGQPVPTH ETEFARDSVF GYTTAFLPDY VSEKTGGRVA AESVARLTFK
DLRAGRAGAW LAGLEGNVVG AVDGETPEDY ALFADAALKA AAHGKRLLFR SAASLLTALA
KLPPQPVAAE SFASLVRDGR AGAVIVGSHV ARATAQLGAL LRERGVVGLP LDVARLPEDH
DALVDALRAG VAHAHAHGLT PVVYTSRGER QFASTAERLA FGAAVSAALM AVVRQLPATL
GFLVSKGGIT SNDVLSTGLE LAAARVLGQI LPGVTVVQTP PWHAVPQLPV VIFPGNVGGD
DALAEVYRRL APSRAQAGRA KLAA