| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0047 |
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| Symbol | |
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| ID | 3672334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 47677 |
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| End bp | 49128 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637708706 |
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| Product | glycolate oxidase, subunit GlcD |
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| Protein accession | YP_313805 |
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| Protein GI | 74316065 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.424124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGTC CCAGCTTCCT CGCGCATCTG CGCACTCTCC TGCCGGCGCA CTGCGTGCTC
AACGAGCGCG AAGACCTGCG GCCCTTCGAG TCCGACGGCC TTGCCGCCTA CCGCAACACG
CCCGACGTCG TCGTGCTGCC GGAGACCGAG GCGCAGGTCG CGGCGATCCT CGAGCTGTGC
CACGCGCACC GGGTCGCGGT GGTCGCGCGC GGCGCCGGCA CCGGGCTGTC GGCCGGCGCG
CTGCCCGTCG ACGGCGCCGT GCTGCTGGTG CTGGCGAAGC TCAACCGCAT CAAGGCGATC
GACCCGCTCG CGCGCACCGC GGTCGTCGAG CCTGGCGTGC GCAACCTCGC GATTTCCGAG
GCGGCCGCCG CCTACAACCT GTATTACGCG CCCGATCCGT CGTCGCAGAT CGCGTGCTCG
ATCGGCGGCA ACGTCGCGGA AAATTCCGGC GGCGTGCATT GCCTCAAATA TGGCCTCACG
GTGCACAACA TCGCGAAGCT GCGCGCCTGG ACCGTCGACG GCAAGCTGCT CGAAATCGGC
AGCGACGCGC TTGACGCGCC GGGCTACGAC CTGCTCGCGC TCCTGACCGG CTCGGAAGGC
ATGCTCGCCG TCATCACCGA AGTCACGGTC AAGCTGCTGC CGCGTCCCGA GCGCGCCCAG
GTCGTCCTCG CGGCCTTCGA CGACGTCGCC AAGGCCGGCG CGGCCGTCGG CAACATCATC
GCCGCGGGCG TCGTCCCGGC CGGACTCGAG ATGATGGACC GCCTCGCGAT CCAGGCCGCC
GAGGCCTTCG TCCACGCCGG CTACCCAATG GCCGAGGCAC TGCTCCTGTG CGAGGTCGAC
GGCGTCAACG AAGAAGTCTC GGCCGACATC TACACCGTGC GCCAGGTGCT CGAAGCCTCC
GGCGCGACCG AGATCCGCAC CGCCGACAGC GAGGAACAAC GGCTGCGCTT CTGGGCCGGC
CGCAAGGCCG CGTTTCCCGC CGTCGGGCGG CTCGCACCCG ACTACTACTG CATGGACGGC
ACGATTCCGC GTGCGCAACT GCCCCACGTC CTGCAGCGCA TCGGCGCGCT GAGCGCCGAG
TTCGGACTCG CGGTCGCCAA CGTCTTCCAC GCCGGCGACG GCAACCTGCA TCCGCTGATC
CTGTTCGACG CCAACACCCC CGGCGAACTC GAGCGCGCCG AGGATTTCGG CGGCAGGATC
CTCGAGCTGT GCGTCGAAGC CGGCGGCACG ATCACCGGCG AACACGGCGT CGGGCTCGAG
AAAATCAAGC AGATGTGCGC GCAGTTCGCG GCGCCCGAAC TCACGCGCTT CCACGACGTG
AAGGCCGCGT TCGATCCCGA GCGCCTGCTC AATCCGGGCA AGGCCGTCCC GGAGCTGCAC
CGTTGCGCCG AATGGGGCGC GATGCACGTG CACGCGGGGC AGTTGCCGCA CCCCGAACTG
CCGAGGTTTT GA
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| Protein sequence | MLSPSFLAHL RTLLPAHCVL NEREDLRPFE SDGLAAYRNT PDVVVLPETE AQVAAILELC
HAHRVAVVAR GAGTGLSAGA LPVDGAVLLV LAKLNRIKAI DPLARTAVVE PGVRNLAISE
AAAAYNLYYA PDPSSQIACS IGGNVAENSG GVHCLKYGLT VHNIAKLRAW TVDGKLLEIG
SDALDAPGYD LLALLTGSEG MLAVITEVTV KLLPRPERAQ VVLAAFDDVA KAGAAVGNII
AAGVVPAGLE MMDRLAIQAA EAFVHAGYPM AEALLLCEVD GVNEEVSADI YTVRQVLEAS
GATEIRTADS EEQRLRFWAG RKAAFPAVGR LAPDYYCMDG TIPRAQLPHV LQRIGALSAE
FGLAVANVFH AGDGNLHPLI LFDANTPGEL ERAEDFGGRI LELCVEAGGT ITGEHGVGLE
KIKQMCAQFA APELTRFHDV KAAFDPERLL NPGKAVPELH RCAEWGAMHV HAGQLPHPEL
PRF
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