Gene Tbd_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0028 
Symbol 
ID3671989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp28413 
End bp29255 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content68% 
IMG OID637708687 
ProductATPase 
Protein accessionYP_313786 
Protein GI74316046 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0705575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TCGCTTCGCT TCTTCCGCGC ATCGAGCGGC TGCTCGATCG TCTCGACGGG 
CCGGCGGCGC CGCCGGCCTT GGACTGGAAA GACGTCGCCG CCGCGCGCTG GCTCGCGCCG
AGCGCGCGCT TCAAACCGAT CGCCCATCCG CAGCGCGTCG CGCTTGCAAA TCTGCTTGCG
ATCGACGCGC AGAAGCAGCG TGTCGACGCC AATACGCGAC AGTTCGTCGC CGGCCGTCCT
GCCAATAACG TGCTGCTGAC CGGCGCACGC GGCTGCGGCA AGTCTTCGCT GGTCAAGGCG
GTTCACGCGG AGTACGCCGG CCAGGGGCTG CGCCTGATCG AAGTCGACAA GGCGGGGCTC
ACCAGCCTGC CCGACCTCTT CGAGGTGCTC GCCGAAGCGG ACGGCTACCG CTTCATCGTC
TTCATCGACG ACCTGAGCTT TGCCGAGCAC GAGGCCGGGT ACGCGAGCCT CAAGGCCGCG
CTCGACGGTT CGCTCGCGGG CCCGAGCGAC AACGTGCTGA TCTACGCGAC CTCGAACCGG
CGCCACCTGA TGCCCGAGTA CATGGCGGAA AATCTCGAAA CGAGCTATCT CGGCGGCGAG
GTGCGCCCGG GCGAAGCGAT CGAGGAAAAA GTTTCGTTGT CCGATCGATT CGGGCTGTGG
GTCTCGTTCC ACGTCATCGA CCAGGACACC TACCTCGCGA TCGCGCGCCA CTGGGTCGCG
TCGCTCGGCG GAACTCTCGA CGCAGGCTTC GAGCGTGCCG CGCTGCAATG GGCGCAGGGC
CGCGGGGCGC GCAACGGGCG GGTCGCCTCG CAGTTCGCGC GCGACTGGGT GGGCAGGCGA
TGA
 
Protein sequence
MTDLASLLPR IERLLDRLDG PAAPPALDWK DVAAARWLAP SARFKPIAHP QRVALANLLA 
IDAQKQRVDA NTRQFVAGRP ANNVLLTGAR GCGKSSLVKA VHAEYAGQGL RLIEVDKAGL
TSLPDLFEVL AEADGYRFIV FIDDLSFAEH EAGYASLKAA LDGSLAGPSD NVLIYATSNR
RHLMPEYMAE NLETSYLGGE VRPGEAIEEK VSLSDRFGLW VSFHVIDQDT YLAIARHWVA
SLGGTLDAGF ERAALQWAQG RGARNGRVAS QFARDWVGRR