Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0018 |
Symbol | |
ID | 3673853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 17837 |
End bp | 19969 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637708677 |
Product | multi-sensor Signal transduction histidine kinase |
Protein accession | YP_313776 |
Protein GI | 74316036 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.2698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTC TGATCGCAGT CGTTCTCGTC GTGGCCGTCA TGCTGCTGGC GTTCCTGTTC AACGCGAGCC GTGGCAGCAG TGCTTTTTCC GACACGCTGC CGACGCTGTT CGTCGGCGGC GGCCTGCTCG GCGCAGCCCT CCTCGCGCTG CTGGTCTGGC GCCTGTGGTG GCTCCGGAAA CGGATTCGCC GCGGCGTCTT CGGCGCCAAG CTGACGCTCA AGCTGCTGCT CATGTTCGGG GTCGTCGCGA CCCTGCCCGG CCTGGTCGTC TACGGCGCTT CGGTGTTCTT TCTCAATCGC TCGATCGAGA CCTGGTTCGA CGTGCGCGTC GACAATGCGC TCGCGTCCGG CGTCAAGCTC GGACAGGCCG CGCTCGACGA CCTGCTGCGC GATCTCGAAC TCAAGGCGCA ACGCATGGCG CTCTCGCTTT CGGACGAGGG CCCGGGCTCG ATCATCACGA GTCTGTCGAC GCTGCGCGAA CAGAGCGCGG TACAGGAGCT GACGCTGTTC GACGAACGCG GCGGCGTCAT CGCGCACGTC AGCGGCGACC GCGGCCTGCT TCCCGTGTTG CCCGAGCGCG GCGTGCTCTG GCAGGTGCGG CAGGAGCATC CGTACAGCCG CATCGAGGAG GTCGCCGACC GCGGCCTCGT CATGCACGTC ATCGTGCCCG TTTACACCAG CGCGCTGACC GGCGAGACGC GCGTGCTCCA GCTCGTGCAG CCGGTGCCGT CGACGCTCGC GCGCGACGCC CAGGCCGTCC AATCGGCGTA CAAGGAGTAC CAGGAGATCG CGGTCTCGCG CCTCGGGCTC AAGCGCATCT ATGGCGTTGC GCTTACGCTC ACGCTCATGC TCGCCCTGCT GCTGACCTTC GTCATCGCCT ACCTGCTGTC GGACCGGCTC GGTTCGCCGC TGCGCACGCT CGCGCGCGGC ACGCGGGCCG TCGCCAAGGG CGACTTCTCG CAGATGCCGT CGGTGTCGAG TCGCGACGAA CTCGGTGTGC TGATCCAGTC GTTCAACCGG ATGACGCGGC AGTTGTCGGA TGCGCGCGAG CAGGTTGCCG AGAACCATCG GCAGACCGAG CAGGCCAAGG CCTTCCTCGA GCGCGTGCTG GCGAACTTGT CGTCCGGCGT CGTCGTGCTC GACGACGCGC TGCGCGTGCG CACGGTCAAT GAAGCCGCCG CACACATCCT CGGCGTCGAC AGCGCGGCGC TCGAAGGACG ATTGCTGACC GCGCTCGGAC AGGACGCCGA CGCGCTACAC GGCTTCGGCG CCGCCGCCGC GACGCGCTTC GGCGAGCACG AAGGCGAATG GCAGGAGCAG GTCGGCTACG CCGGATCGGA CAGCAGGCAG ACCTTGCTGC TGCGCGGCAC CCGTCTGCCG TCGGGCTACG AGCGCGGCTA CGTGCTCGTG TTCGACGACG TGACCAAGCT CATCGACGCC GAACGCAACG CGGCGTGGAG CGAAGTCGCA CGGCGTCTCG CGCACGAGAT CAAGAATCCG CTCACGCCGA TCCAGCTCTC GGCCGAGCGC ATCGCGCGCA AGCTCGGCGG GCGGCTCGAA GCGCAGGACG CCGACTTCCT CGCGCGCGCG ACGCAGACCA TCGTCAATCA GGTCGCTGCG ATGAAGAACA TGGTCGACGC GTTCGCCGGC TATGCACGGA TGCCGCGCGC GCGGCTCGAA GCGCTCGATC TCAATGCGCT GGTGCGCGAT GTGCTGAGTC TCTACGACGC CAAGGCGCTC GGCCTGCAAT TGCATCTCGG CGACGACCTG CCGCAGGTCG CAGGCGACGC GACGTTATTG CGTCAGGTGA TACATAATCT GATGCAAAAT GCGCAGGATG CGCTAGCCGG GCACGTCTCG CCGCGTCTGG ACGTGGAGAC ACACCTCAAG AAGAATCAGA CAGTGAGTTT GACAGTGACA GACAATGGAG CCGGCTTCCC GGAGCACCTG ATGACGCGGC TGTTCGAGCC TTATGCAACG ACCAAGGCGA AGGGAACGGG CCTTGGCCTC GCCATCGTCA AGAAAATCGT GGAAGAGCAC CACGGCAAGA TCCAGATCGA GAACCTCAAA TCGGGCGGGG CGGCGGTCCA CATCACGCTG CCGGTCCATG CGGCTGCAGG AGAGAACACG TGA
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Protein sequence | MRRLIAVVLV VAVMLLAFLF NASRGSSAFS DTLPTLFVGG GLLGAALLAL LVWRLWWLRK RIRRGVFGAK LTLKLLLMFG VVATLPGLVV YGASVFFLNR SIETWFDVRV DNALASGVKL GQAALDDLLR DLELKAQRMA LSLSDEGPGS IITSLSTLRE QSAVQELTLF DERGGVIAHV SGDRGLLPVL PERGVLWQVR QEHPYSRIEE VADRGLVMHV IVPVYTSALT GETRVLQLVQ PVPSTLARDA QAVQSAYKEY QEIAVSRLGL KRIYGVALTL TLMLALLLTF VIAYLLSDRL GSPLRTLARG TRAVAKGDFS QMPSVSSRDE LGVLIQSFNR MTRQLSDARE QVAENHRQTE QAKAFLERVL ANLSSGVVVL DDALRVRTVN EAAAHILGVD SAALEGRLLT ALGQDADALH GFGAAAATRF GEHEGEWQEQ VGYAGSDSRQ TLLLRGTRLP SGYERGYVLV FDDVTKLIDA ERNAAWSEVA RRLAHEIKNP LTPIQLSAER IARKLGGRLE AQDADFLARA TQTIVNQVAA MKNMVDAFAG YARMPRARLE ALDLNALVRD VLSLYDAKAL GLQLHLGDDL PQVAGDATLL RQVIHNLMQN AQDALAGHVS PRLDVETHLK KNQTVSLTVT DNGAGFPEHL MTRLFEPYAT TKAKGTGLGL AIVKKIVEEH HGKIQIENLK SGGAAVHITL PVHAAAGENT
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