Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_0016 |
Symbol | |
ID | 3673851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 15974 |
End bp | 17230 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637708675 |
Product | Fmu, rRNA SAM-dependent methyltransferase |
Protein accession | YP_313774 |
Protein GI | 74316034 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.398476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.248834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAGC TGCAAAAGAT CGCCGCCGAC GCGCTCGAGG ATGTCCTCGC GGGCGCAGCC TTGCACCAGG TGTTGCCCGC CGGGCAGCGT CTGCTCACGA CGCCCGGCGA GCGCGGCGCG CTGCAGGACC TCGTCTACGG CAGCCTGCGC CAGCTGGGCC GCATCGACGC CTGGCTCGAC GCGCTGCTCG AGCGCCCGCT GACCGATCCG CACCTCGAGT CGCTGTTGCG GATCGCGCTC TACCAGATGG CCTACACCCG GGCCCCCGCG CACGCGATCG TGCACAACGC CGTCAGCGCG GCCGGCGGCG GCTGGCGGCG CGGTCTCGCC AACGCGGTGC TGCGCAATTT CCAGCGCCGC CGCGCCGAAC TCGACGCCCT TGCCGAGGCG AAACCGGGCG CGCGCTGGTC ACATCCCGAG TGGTGGATCG AGAAGCTGCG CGCCGCGTAT CCCGAGCGCT GGCAGGCGAT TCTCGCCGCG AGCCTGCTGC ATCCGCCGTT TACCCTCAGG GTCAGCAGCC GGCACGGCGA CGTCGCGAGC TATCTCGCCG AGCTCAATGA GGCCGGCCTG CCCGCGCACC GGAGCGGCCA ACAGGCGGTC ACGCTCGAGA AGGCCGTCCC GGTCCAGCTG CTGCCGGGAT TTGCCGAAGG CCGGGTATCG GTTCAGGACG CAGGCGCGCA GCACGCCGCG CGCCTGCTCG GCGCCAAGCC GGGCGAACGC GTGCTCGACG CCTGCGCCGC GCCGGGAGGC AAGACTGGCC ACATTCTCGA GCTGGCCGAC GTCGACCTCG TCGCACTCGA CGTCGACGCG GCCCGGCTCG CGCGCGTGCA GGAGAACCTC GACCGCCTGC GTCTGCACGC GACCCTGGTC GAGGGCGATG CCGCGCGGCC CGAGGCATGG TGGGACGGCC GCCCGTTCGA CCGCATCCTG GCCGACGTGC CGTGCAGCGC CTCGGGCGTC GTGCGCCGCA ACCCCGACAT CAAGTGGCTG CGCCGACCGG GCGACATCGC TCAATTTGCC GCGCAGCAGG CCGTAATAGT GGAGGCGCTT TGGCGCCTGC TGCGCCCGGG TGGTACATTG CTTTACGCCA CCTGCTCGAT ATTTCACGAA GAAAACGAGG GCCAGGTGCA GGCCTTCCTG GCGCGCCACG TCCAGGATGC CGAACGCTGT TCGCTCCCTG AACCTTTGTC CGACGGGTCG CTACTGCCTG ATGCCGAGCA TGATGGTTTC TTCTACGCCC TGCTGCGCAA GATTTGA
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Protein sequence | MRKLQKIAAD ALEDVLAGAA LHQVLPAGQR LLTTPGERGA LQDLVYGSLR QLGRIDAWLD ALLERPLTDP HLESLLRIAL YQMAYTRAPA HAIVHNAVSA AGGGWRRGLA NAVLRNFQRR RAELDALAEA KPGARWSHPE WWIEKLRAAY PERWQAILAA SLLHPPFTLR VSSRHGDVAS YLAELNEAGL PAHRSGQQAV TLEKAVPVQL LPGFAEGRVS VQDAGAQHAA RLLGAKPGER VLDACAAPGG KTGHILELAD VDLVALDVDA ARLARVQENL DRLRLHATLV EGDAARPEAW WDGRPFDRIL ADVPCSASGV VRRNPDIKWL RRPGDIAQFA AQQAVIVEAL WRLLRPGGTL LYATCSIFHE ENEGQVQAFL ARHVQDAERC SLPEPLSDGS LLPDAEHDGF FYALLRKI
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