| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0003 |
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| Symbol | gyrB |
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| ID | 3673838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2860 |
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| End bp | 5331 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637708662 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_313761 |
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| Protein GI | 74316021 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA AGCCCGAGTA CGCGATGCCC GCCGACAGCA ACGGCGGTTA CGACGAAGAC
AGCATCCAGC AGCTGGAAGG CCTGGAAGCC GTGCGCAAGC GCCCCGGCAT GTACATCGGC
GACACCTCCG ACGGCACCGG CCTGCACCAC ATGGTGTTCG AGGTACTCGA CAACGCGATC
GACGAGGCGC TGGCCGGCTG GTGCGACGAC ATCAAGGTCA TCATCCACCC CGACAACTCG
ATTTCGATTT CGGACAACGG CCGCGGCATC CCGGTCGGCG TCAAGTTCGA CGACAAGCAC
GAACCCAAGC GCAGCGCCGC CGAAATCGTC ATGACCGTGC TGCACGCCGG CGGCAAATTC
AACCAGAACA GCTACAAGGT CTCGGGCGGC CTGCACGGCG TCGGCGTCTC GTGCGTCAAC
GGCCTGTCGA AATGGCTCAA GCTCGTCGTG CGCCGCGACG GCAAGAAATA CGCGCTGACC
TTCAACCAGG GCAAGGTCGT CGACCGCGCC GTGGAAATCC AGAACGGCGT CGAGGTCTCG
CCGATGCCGG TCGTCGGCGA TACCGAAGGC CGCGGCACCG AAGTGCACTT CCTCGCCGAC
GAGGAAATCT TCGGCAAGGT CGAATTCCAC TTCGACATCC TCGCCAAGCG CATCCGCGAG
CTGTCCTTCC TCAACAACGG CGTCAAAATC GAACTGCTCG ACCACCGCGA CGGCAAGAGC
GAAAACTTCG CGCACTCGGG CGGTGTCAAG GGCTTCGTCG AATACATGAA CCGCGTCAAG
TCGGTGCTGC ATCCGAAGAT CTTCCATGCC GTCGGCGAGA AGGATGGCAT GACCGTCGAA
GTCGCGATGC AGTGGAACGA CAGCTACTCC GAAACCGTGC AGTGCTTCAC CAACAACATC
CCGCAGCGCG ACGGCGGCAC CCACCTGACC GGCATGCGCA TGGCGATGAC GCGGGTGCTG
AACAAGTACA TCGAGGAAAA CGAAGTCGCC AAGAAGGCCA AGGTCGAGAC CACCGGCGAC
GACATGCGCG AAGGCCTGAC CTGCGTGCTC TCGGTCAAGG TCCCCGAGCC CAAGTTCTCG
AGCCAGACTA AGGACAAGCT CGTCTCGAGC GAAGTCCAGC CCGTGGTGCA GGAAGTCGTC
GGCCAGAAGC TCGCCGAATT CCTGCTCGAG AACCCCAACG ACGCCAAGCT CCTGTGCGCC
AAGATCGTCG ACGCCGCGCG GGCCCGCGAG GCCGCGCGCA AGGCGCGCGA GATCACACGC
CGCAAGGGCG TGATGGACGG CCTCGGCCTG CCCGGCAAGC TCGCCGACTG CCAGGAAAAA
GACCCGGCGC TTTCCGAAAT CTATCTCGTC GAGGGCGATT CGGCCGGCGG CTCCGCCAAG
CAGGGCCGCG ACCGCAAGTT CCAGGCGATC CTGCCGCTCA AGGGCAAGAT TCTCAACGTC
GAGCGCGCGC GCTTCGACAA GGTTATCGGC AGCCAGGAAA TCGCCACGCT GATCACCGCG
CTCGGCACGA GCATCGGCAA GGACGACTAC AACCCCGACA AGCTCAGATA TCACCGCATC
ATCATCATGA CCGACGCCGA CGTCGACGGC GCCCACATCC GCACCCTGCT GCTGACCTTC
TTCTATCGCC AGATGCCGGA GCTCGTCGAG CGCGGCCACG TCTACATCGC GCAGCCGCCG
CTCTACAAGG TCAAGCACGG CCGCTCCGAG CGCTACATCA AGGACGAACA CGCGCTCAAA
GAGCATTTGA TGGCCGAGGC GATGAAGGAC GCCGAGCTGA CCCCGATGGA AGGCGCGATG
CCGATCGCCG GCGAAGCCCT CGAAACGCTC GCGCGCGAAT ACTTCCTCGC CGAGGCCGTC
TGCGACCGGC TGGCCCGCCT GCTGCCCGAC GACGTTCTGC AGGCGCTCAT GCGCATCCCG
CGGCTCTCGC TCGCCGACAG CGCCGCGGCG ATGATGAGCG AAGCGAGCCT AGGCGCCGCG
CTCGACGCCG ACAAGTTCGA AGTCGCCGCC GAATACCTGA GCGAGACCGA CAGCCACCGC
CTGCGCATCA CACGTCACTC GCACGGCAAC GCCTACGTCA ACTTCCTCGA AGCCGATCTG
CTCGAATCGG GCGACTACGA CCAGCTCGTC AAGGTCGGCG ATATGCTGCG CGACCTCATG
GGCCCCGGCG CCCGCGCCAG GCGCGGCGAG AAGGAAGCGC CCGTGCAAAG TTTCCGTGAG
GCGATGGACT GGTACCTCGC CGAAGTCAAG CGCGGCATGA GCATCCAGCG CTACAAAGGC
TTGGGCGAAA TGAACCCCGA GCAGCTGTGG GAAACCACCA TGGACCCGAA GGTGCGCCGC
CTGATGAAAG TGCAGATCGA GGATGCGATC TCGTCCGACC AGATCTTCAC CACACTGATG
GGCGACGAGG TCGAGCCGCG GCGGAACTTT ATTGAGACGA ATGCGTTGGG GGTGAGGAAC
CTCGACGTTT AA
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| Protein sequence | MSNKPEYAMP ADSNGGYDED SIQQLEGLEA VRKRPGMYIG DTSDGTGLHH MVFEVLDNAI
DEALAGWCDD IKVIIHPDNS ISISDNGRGI PVGVKFDDKH EPKRSAAEIV MTVLHAGGKF
NQNSYKVSGG LHGVGVSCVN GLSKWLKLVV RRDGKKYALT FNQGKVVDRA VEIQNGVEVS
PMPVVGDTEG RGTEVHFLAD EEIFGKVEFH FDILAKRIRE LSFLNNGVKI ELLDHRDGKS
ENFAHSGGVK GFVEYMNRVK SVLHPKIFHA VGEKDGMTVE VAMQWNDSYS ETVQCFTNNI
PQRDGGTHLT GMRMAMTRVL NKYIEENEVA KKAKVETTGD DMREGLTCVL SVKVPEPKFS
SQTKDKLVSS EVQPVVQEVV GQKLAEFLLE NPNDAKLLCA KIVDAARARE AARKAREITR
RKGVMDGLGL PGKLADCQEK DPALSEIYLV EGDSAGGSAK QGRDRKFQAI LPLKGKILNV
ERARFDKVIG SQEIATLITA LGTSIGKDDY NPDKLRYHRI IIMTDADVDG AHIRTLLLTF
FYRQMPELVE RGHVYIAQPP LYKVKHGRSE RYIKDEHALK EHLMAEAMKD AELTPMEGAM
PIAGEALETL AREYFLAEAV CDRLARLLPD DVLQALMRIP RLSLADSAAA MMSEASLGAA
LDADKFEVAA EYLSETDSHR LRITRHSHGN AYVNFLEADL LESGDYDQLV KVGDMLRDLM
GPGARARRGE KEAPVQSFRE AMDWYLAEVK RGMSIQRYKG LGEMNPEQLW ETTMDPKVRR
LMKVQIEDAI SSDQIFTTLM GDEVEPRRNF IETNALGVRN LDV
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