| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0002 |
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| Symbol | |
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| ID | 3673837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1689 |
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| End bp | 2792 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637708661 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_313760 |
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| Protein GI | 74316020 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.870835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTAA TACAAAGCGA ACGCAATGCC TTGTTGAGCG CCCTCTCGGC AGTCGTCGGG
GTCGTCGAGA GAAGGCACAC CCTGCCGATC CTGTCCAATC TTCTGCTCGA GAAGAAAGCC
GGCACGCTGA CCCTGCTCGC GACCGACCTC GAGCTCCAGG TCAGCACCCG GCTCGAGGCC
CAGGGCGGTG ACGACTTCGC GATCACGATC GCGGCGCGCA AGCTCTTCGA CATCGTCCGC
GCCCTGCCCG ATTCGGCGTC GGTCAAGCTC GATACCAAGG ACAGCCAGGT CGTCGTCAGC
GCGGGCAAGT CGCGCTTCAC GCTGCAGACG CTGCCTGCGG CCGACTTCCC GCGCGTCGAG
ACCGGCGCCG GGGTCGGCAC GGTCGTCCGC CTCCCGCAGA AAACCCTGAA GCGCCTGCTC
CAGCTCGTGC AGTTCGCGAT GGCGAGCCAG GACATCCGCT ACTACCTGAA CGGCATGCTG
CTCGTCCTCG ACGGCCAGCA GCTGCGCGTC GTCGCGACCG ACGGCCACCG CCTGAGCTAC
GCCGAGACCA CGCTCGACGC GCCCACCGAC GCGCAGGAAG TCATCATCCC GCGCAAGACC
GTCATCGAAT TGTCCAAGCT CCTGAGCGAC AGCGACGAGC CGGTCGAACT GCGCATCGGC
AGCAACCAGG TGACGATCAT GCTGCCCGGA ACCGAGCTCG TGACCAAGGT CGTCGACGGC
AAATTCCCCG ACTACCAGCG CGTCATCCCG GCAAATCAGC CGCGCCACCT CAAGGCCAAC
CGGCAGACCG TCGTGCAGGC GCTGCAGCGC GCGGCGATCC TGTCGAACGA GAAATTCCGC
GGCGTGCGCC TGGTGATGAG CGACAACACG CTCGGCATCG TCTGCAACAA CAACGAGCAG
GAAGAAGCGG CCGACGAAAT CGAGGTCAGC TACAACGGCG ATCCGCTCGA CGTCGGCTTC
AACGTCACCT ACCTGCTCGA CGGCCTCGGT GCCGTCAACA CCGACGAGAT CACGCTGTCG
CTCGGCGACG CCAACAGCAG CATGCTGCTC ACGAGCGAAG GGGAGCCGGG GTTCAAATAC
GTCGTGATGC CGATGCGCAT CTGA
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| Protein sequence | MLLIQSERNA LLSALSAVVG VVERRHTLPI LSNLLLEKKA GTLTLLATDL ELQVSTRLEA
QGGDDFAITI AARKLFDIVR ALPDSASVKL DTKDSQVVVS AGKSRFTLQT LPAADFPRVE
TGAGVGTVVR LPQKTLKRLL QLVQFAMASQ DIRYYLNGML LVLDGQQLRV VATDGHRLSY
AETTLDAPTD AQEVIIPRKT VIELSKLLSD SDEPVELRIG SNQVTIMLPG TELVTKVVDG
KFPDYQRVIP ANQPRHLKAN RQTVVQALQR AAILSNEKFR GVRLVMSDNT LGIVCNNNEQ
EEAADEIEVS YNGDPLDVGF NVTYLLDGLG AVNTDEITLS LGDANSSMLL TSEGEPGFKY
VVMPMRI
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