| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0001 |
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| Symbol | |
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| ID | 3673836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 137 |
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| End bp | 1510 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637708660 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_313759 |
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| Protein GI | 74316019 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCT CCGCTCCCTG CCACCCGAAT ATGGATTCCT TCTGGGACCT CTGCCAAGAG
CGCTTCCGCG CCAACCTGAC CCAGCAGCAA TTCAGCACCT GGATCAAGCC GCTCGTCTTC
GATGACGGCG GCGACGAGGT GCGGATACTC GCGCCCAACC ACTTCGTAAT GGACTGGGTG
CGCGAAAAAT TCGCCGAGCA CATCGACAGC TGGGCGCAGG AATTCTACGC ACGGCCGGTC
GCCATCAGCT ACGCCCTCGG CAAGAAGCCG GCACCCGCCC GGGCAGCGCC CGCCGCACCG
ACGGCGAATC CGGCCGAGCC CGCTGCCCCT GCTGCGCCAG CACCGGCCCA GGTCGGCATG
CGCATCAACC CGGGCTTCAC CTTCGACAAC TTCGTCTCCG GGCGCGCCAA CCAGCTCGCG
CGGGCCGCTG CGCTGCAGAT CGCCGAGAAC CCCGGCGTCG CCTACAACCC GCTGTTCGTG
TACGGCGGGG TCGGTCTCGG CAAGACCCAC CTGCTGCAGG CGATCGGCAA TACGGTCCGG
CAGACGAATC CGGCCGCGCG CATCAGCTAT ATCCACGCCA ACGATTACGT CGACGACGTC
GTCAAGGCCT ATCTCAACAA GCAGTTCGAC GATCTCAAGC GCCGCTACAT GTCGCTCGAC
CTGTTGCTGA TCGACGACAT TCAGTTCCTG GCGAAGAAGG ACCGCACCCA GGAGGAGTTC
TTCTACGTCT TCAATTCGCT GATCGAGAAC AAGAAACAGA TCGTCATCAC CTGCGACACC
TTCCCGAAGG AGATCAGCGG GCTCGACGAC CGCCTCAAGT CGCGCTTCGC CTGGGGTCTG
ACCGTCGCGG TCGAACCACC CGAGCTCGAA ATGCGCGTCG CGATCCTGCT CGCCAAGGCG
CGGGCCGAGT CGGTCACGCT CGACGAGAAC GTCGCCTTCT TCATCGCCAA GCAGGTCCGC
TCCAACGTGC GCGAACTCGA AGGCGCGCTC AAGCGCGTGA TCGCCTTCTC GCGCTTCCAC
GAAAAGCCGA TCACGATGGA ACTTGTGAAA GAGGCCTTGC GCGACCTGAT CGCGTCGACC
TCGCGCATGG TGTCGATCGA GAACATCCAG AAAACGGTCG CCGACTTCTA CAAGATCAAG
GTCGCCGACA TGTTCTCGAA GAAGCGCACC CGCAACCTGG CGCGGCCGCG CCAGATCGCG
ATGGCGCTCG CCAAGGAATT GACCAACCAG AGCCTGCCCG AAATCGGGGA ATCCTTCGGC
GGCCGCGACC ATACGACCGT GATCCACGCC TGCCGCAAGG TCGCCGAACT GCGCGAGACC
GAGGCCGACA TCGGACGCGA CTATCTCGTG TTGTTACAAA CGCTGACAGG CTGA
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| Protein sequence | MLRSAPCHPN MDSFWDLCQE RFRANLTQQQ FSTWIKPLVF DDGGDEVRIL APNHFVMDWV
REKFAEHIDS WAQEFYARPV AISYALGKKP APARAAPAAP TANPAEPAAP AAPAPAQVGM
RINPGFTFDN FVSGRANQLA RAAALQIAEN PGVAYNPLFV YGGVGLGKTH LLQAIGNTVR
QTNPAARISY IHANDYVDDV VKAYLNKQFD DLKRRYMSLD LLLIDDIQFL AKKDRTQEEF
FYVFNSLIEN KKQIVITCDT FPKEISGLDD RLKSRFAWGL TVAVEPPELE MRVAILLAKA
RAESVTLDEN VAFFIAKQVR SNVRELEGAL KRVIAFSRFH EKPITMELVK EALRDLIAST
SRMVSIENIQ KTVADFYKIK VADMFSKKRT RNLARPRQIA MALAKELTNQ SLPEIGESFG
GRDHTTVIHA CRKVAELRET EADIGRDYLV LLQTLTG
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