| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3738 |
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| Symbol | |
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| ID | 3625087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4834201 |
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| End bp | 4835928 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637702570 |
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| Product | putative surface layer protein |
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| Protein accession | YP_307180 |
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| Protein GI | 73671165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.576213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TGACTTTACT AGCCTTCTTG TCCATTTTTC TAATTATAGG TTTAGCATCA
CCAGCGCTTG CAGCCGATAT AACCGGTGAG CGAACGCTAA ACACTACAAG CATGAAAGCA
GGAGAAAGCT TAAGAGTTAC TTTAAATGTC ACAGTTTCAG GTGGCACACT TTACGCACCT
GGGATTGACG AAAACCTTCC AGACAGTTGG ACTGTAACTC CAGTCCAGAA CAACGGAATG
ATATATCAGG CTGCGAACAC GCAATGGGCA CTCATTGATG AAATGGGGCC TGGTAAAAAA
ACAGTCATAT ATGATGTTTT CGTGCCGGCA ACAACGAAAA ACGGGACATA CTCAATTACA
GGAGAAGTAT CAGCAAAAGA ATGGGCTGAT GGAGAAGAAA TCAAAAGGCA AAACAACACC
ACAGGGGATA CGAATGTAAC GATAGGGGTT CCTGACATTT ATAAACCAAT ACCAGTTGCT
GCTTTTAATG CCGACATAAC TAACGGTTTT GCCCCACTTA CGGTTAACTT CACTGACCAA
TCCACAGGTA CACCTACATC ATGGATTTGG GATTTTGGAG ATGGTAACAA TGCTACAGAG
CAGAACCCAG TGCATACATA CACATCAGCC GGTAATTACA CAGTCAATCT TACGGTTTCA
AATGCAGAAG GAAGTGATTC TGAAGTAAAG ACCGAGTACA TTATCGTAAG TGAACCTCTA
CCTGGAGCTC CGGTTGCAAA CTTCACAGCC AACAGGACCA GTGGAAAAGC TTCGCTTGAT
GTTCAGTTTA CAGATGCATC AATTGGCAAC ATCTCATCCT ATTCTTGGGA TTTCAATAAT
GATGGAACTG TTGACAGCAC TGAACAGAAC CCAGTATACA CTTATGCTGT AGCCGGCATC
TACACTGTCA ACCTCACTGT TTTCAACGAG GATGGAAGCG ATTCTGAGGT AAAAACTGGG
TATATTAAGG TATCCAGTCA ATCTTCAGCA AAGCCAGTAG CTGCATTTTC TGCGTCTCCA
ACATCAGGAA AAACGCCATT AAAAGTTAAA TTTACTGATA CTAGCACTGG CTCTCCAACT
TCCTGGTTCT GGAACTTTGG AGATGGATCA AAATCATTCC ACCAGAATCC GATTCATAAG
TATTCAAAAG CAGGAACATA TACGGTTAAT TTAACAGTAA AGAATGCTAA AGGCAAGAAC
ACGGTAACAA AAACACAATA TATAAAAGTG ATAACAAAGC CGGTTGCAAA CTTCACCAGC
AGTGTTACAT CAGGAAAAAC CCCATTAAAG GTTAAATTTA CCGACACAAG CACCGGGACA
CCTGCTAAAT GGAGATGGGA CTTTGGAGAC GGAGCAAAGT CATTCCAACA GAATCCGATT
CATAAGTATT CAAAAGCAGG AATATATACT GTTAACTTGA CGGTAAAGAA TGCTAAAGGC
AAGAACACGG TAACAAAAAC AGAATATATA AAAGTGATAT CAAAACCTGT GGCAAACTTC
ACCAGCAGTG TTACATCAGG AAAAACGCCA TTAAAGGTTA AATTTACTGA CACGAGCACA
GGGACACCTG CTAAATGGAG ATGGGACTTT GGAGACGGAG CAAAGTCATT CCAACAGAAT
CCGATTTATA AGTATTCAAA AGCAGGGACA TACACTGTTA ACTTGACAGT AAAGAATGCT
AAAGGCAAGA ACACGGTAAC AAAAACAGAA TATATAAAAG TTGTATAA
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| Protein sequence | MKKMTLLAFL SIFLIIGLAS PALAADITGE RTLNTTSMKA GESLRVTLNV TVSGGTLYAP
GIDENLPDSW TVTPVQNNGM IYQAANTQWA LIDEMGPGKK TVIYDVFVPA TTKNGTYSIT
GEVSAKEWAD GEEIKRQNNT TGDTNVTIGV PDIYKPIPVA AFNADITNGF APLTVNFTDQ
STGTPTSWIW DFGDGNNATE QNPVHTYTSA GNYTVNLTVS NAEGSDSEVK TEYIIVSEPL
PGAPVANFTA NRTSGKASLD VQFTDASIGN ISSYSWDFNN DGTVDSTEQN PVYTYAVAGI
YTVNLTVFNE DGSDSEVKTG YIKVSSQSSA KPVAAFSASP TSGKTPLKVK FTDTSTGSPT
SWFWNFGDGS KSFHQNPIHK YSKAGTYTVN LTVKNAKGKN TVTKTQYIKV ITKPVANFTS
SVTSGKTPLK VKFTDTSTGT PAKWRWDFGD GAKSFQQNPI HKYSKAGIYT VNLTVKNAKG
KNTVTKTEYI KVISKPVANF TSSVTSGKTP LKVKFTDTST GTPAKWRWDF GDGAKSFQQN
PIYKYSKAGT YTVNLTVKNA KGKNTVTKTE YIKVV
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