Gene Mbar_A3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3738 
Symbol 
ID3625087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4834201 
End bp4835928 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content41% 
IMG OID637702570 
Productputative surface layer protein 
Protein accessionYP_307180 
Protein GI73671165 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.576213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TGACTTTACT AGCCTTCTTG TCCATTTTTC TAATTATAGG TTTAGCATCA 
CCAGCGCTTG CAGCCGATAT AACCGGTGAG CGAACGCTAA ACACTACAAG CATGAAAGCA
GGAGAAAGCT TAAGAGTTAC TTTAAATGTC ACAGTTTCAG GTGGCACACT TTACGCACCT
GGGATTGACG AAAACCTTCC AGACAGTTGG ACTGTAACTC CAGTCCAGAA CAACGGAATG
ATATATCAGG CTGCGAACAC GCAATGGGCA CTCATTGATG AAATGGGGCC TGGTAAAAAA
ACAGTCATAT ATGATGTTTT CGTGCCGGCA ACAACGAAAA ACGGGACATA CTCAATTACA
GGAGAAGTAT CAGCAAAAGA ATGGGCTGAT GGAGAAGAAA TCAAAAGGCA AAACAACACC
ACAGGGGATA CGAATGTAAC GATAGGGGTT CCTGACATTT ATAAACCAAT ACCAGTTGCT
GCTTTTAATG CCGACATAAC TAACGGTTTT GCCCCACTTA CGGTTAACTT CACTGACCAA
TCCACAGGTA CACCTACATC ATGGATTTGG GATTTTGGAG ATGGTAACAA TGCTACAGAG
CAGAACCCAG TGCATACATA CACATCAGCC GGTAATTACA CAGTCAATCT TACGGTTTCA
AATGCAGAAG GAAGTGATTC TGAAGTAAAG ACCGAGTACA TTATCGTAAG TGAACCTCTA
CCTGGAGCTC CGGTTGCAAA CTTCACAGCC AACAGGACCA GTGGAAAAGC TTCGCTTGAT
GTTCAGTTTA CAGATGCATC AATTGGCAAC ATCTCATCCT ATTCTTGGGA TTTCAATAAT
GATGGAACTG TTGACAGCAC TGAACAGAAC CCAGTATACA CTTATGCTGT AGCCGGCATC
TACACTGTCA ACCTCACTGT TTTCAACGAG GATGGAAGCG ATTCTGAGGT AAAAACTGGG
TATATTAAGG TATCCAGTCA ATCTTCAGCA AAGCCAGTAG CTGCATTTTC TGCGTCTCCA
ACATCAGGAA AAACGCCATT AAAAGTTAAA TTTACTGATA CTAGCACTGG CTCTCCAACT
TCCTGGTTCT GGAACTTTGG AGATGGATCA AAATCATTCC ACCAGAATCC GATTCATAAG
TATTCAAAAG CAGGAACATA TACGGTTAAT TTAACAGTAA AGAATGCTAA AGGCAAGAAC
ACGGTAACAA AAACACAATA TATAAAAGTG ATAACAAAGC CGGTTGCAAA CTTCACCAGC
AGTGTTACAT CAGGAAAAAC CCCATTAAAG GTTAAATTTA CCGACACAAG CACCGGGACA
CCTGCTAAAT GGAGATGGGA CTTTGGAGAC GGAGCAAAGT CATTCCAACA GAATCCGATT
CATAAGTATT CAAAAGCAGG AATATATACT GTTAACTTGA CGGTAAAGAA TGCTAAAGGC
AAGAACACGG TAACAAAAAC AGAATATATA AAAGTGATAT CAAAACCTGT GGCAAACTTC
ACCAGCAGTG TTACATCAGG AAAAACGCCA TTAAAGGTTA AATTTACTGA CACGAGCACA
GGGACACCTG CTAAATGGAG ATGGGACTTT GGAGACGGAG CAAAGTCATT CCAACAGAAT
CCGATTTATA AGTATTCAAA AGCAGGGACA TACACTGTTA ACTTGACAGT AAAGAATGCT
AAAGGCAAGA ACACGGTAAC AAAAACAGAA TATATAAAAG TTGTATAA
 
Protein sequence
MKKMTLLAFL SIFLIIGLAS PALAADITGE RTLNTTSMKA GESLRVTLNV TVSGGTLYAP 
GIDENLPDSW TVTPVQNNGM IYQAANTQWA LIDEMGPGKK TVIYDVFVPA TTKNGTYSIT
GEVSAKEWAD GEEIKRQNNT TGDTNVTIGV PDIYKPIPVA AFNADITNGF APLTVNFTDQ
STGTPTSWIW DFGDGNNATE QNPVHTYTSA GNYTVNLTVS NAEGSDSEVK TEYIIVSEPL
PGAPVANFTA NRTSGKASLD VQFTDASIGN ISSYSWDFNN DGTVDSTEQN PVYTYAVAGI
YTVNLTVFNE DGSDSEVKTG YIKVSSQSSA KPVAAFSASP TSGKTPLKVK FTDTSTGSPT
SWFWNFGDGS KSFHQNPIHK YSKAGTYTVN LTVKNAKGKN TVTKTQYIKV ITKPVANFTS
SVTSGKTPLK VKFTDTSTGT PAKWRWDFGD GAKSFQQNPI HKYSKAGIYT VNLTVKNAKG
KNTVTKTEYI KVISKPVANF TSSVTSGKTP LKVKFTDTST GTPAKWRWDF GDGAKSFQQN
PIYKYSKAGT YTVNLTVKNA KGKNTVTKTE YIKVV