Gene Mbar_A3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3715 
Symbol 
ID3624946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4790473 
End bp4791684 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content44% 
IMG OID637702548 
Producthypothetical protein 
Protein accessionYP_307158 
Protein GI73671143 
COG category[S] Function unknown 
COG ID[COG4069] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.906729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTTC TGTCAAACGG AATGAAAATG AAAATCGGTC TGGTAATTCA TGGTCCCGAA 
GTGATCGATT CGGGAGAAGC TAAAAGAGTT TTTGAAAAGC TTTCCTGTGT GGGCAAAGTC
GAGGCGAGGC TTGGCGGAAC AATGGGAAAA GTAGCTGTCC TGGATGCTGG ACTTGAAAAC
ATTATAGACA TAAGTAAGCA CCAGAAGCCA AGTGCCTGCA TTGAATCGCT TTTCGAAACC
TCAGATCTTG TATGCCTCCT GAACCGGGGA AAAACCATTG AAACCGGGAA GGCATTTGGA
GAAATGGTTG CTGTCCGGCT TAGAGAACTT GAGATAAAAC CTCTTATCCA GATCGAAAGC
CCGCAAAGTA CAAATGGAAT TCTGATACCT CTTAATAAAA AAGCTGGAGA ATATGGAGAA
TATCTTGAGA AGCTTTCTGA AATCCTGGGG CTTCCTATGG AAAGTCCTTT GCCCCTTCAA
AGTTCGAGAG TTCAAAATTC TGTTCTTGTA AAAAAGTGTC CGGGAACAGG CAAAATCCAG
GTTATACGCA AGCTTTCAGG CGTTTTTCCC GGAGAAAATA TCCTGGTAAA CGGAACCGTG
ATTGGAAAAG CCTTTTCTTC CAAAGTGAGT ATAATCTCCG AAAACGGCTT TATTGTCGCA
ATCGAAGGGG GAGAAATAAA AGAACATGGG CTCGAAAAAC TTCATAATTA TAAAAAAAGA
GACCCTGTTG ACCTTGCAAA AGCCTGGGTA AAAAGCGGTG GCCTGAGAAG AAGCAATTTC
TCTCCCCTGC AAGCCCGGAA ACCAAATTTA CGAGGCAAAG ATTCTGGTTT TTCTTACAGG
CCGGCCGCAG GAAGAGTCGT ACTTATAGAC CATGCTGCGG AAGATACTTT TGAGTTGGCT
GCCGACGCCG AACTTGTAGT TACCATAGGA GATGACACCA CAACAATAGC AGGTGACATT
CTCTTCAGGC TTGGAATTCC CATTCTCGGG ATTACGGACG GAGATTGTGA CAGGCTTGCT
TGCCGAACGG TTATTTTTCC AGGTTCTATT GTGCTCAGGC TGGCAGCGGG AAATGATGAT
GTTCTGGGTA AAAAACTGAA GCAGGAACTT TTAGGGGGAG AAAATTCTGC GATTTTAGAG
GATATATACG CTTTTAAAGA AGATGTGCTG AAACTTGCAG AGCCCTTGAT TGAAGCTGTT
TTTGAATACT GA
 
Protein sequence
MLLLSNGMKM KIGLVIHGPE VIDSGEAKRV FEKLSCVGKV EARLGGTMGK VAVLDAGLEN 
IIDISKHQKP SACIESLFET SDLVCLLNRG KTIETGKAFG EMVAVRLREL EIKPLIQIES
PQSTNGILIP LNKKAGEYGE YLEKLSEILG LPMESPLPLQ SSRVQNSVLV KKCPGTGKIQ
VIRKLSGVFP GENILVNGTV IGKAFSSKVS IISENGFIVA IEGGEIKEHG LEKLHNYKKR
DPVDLAKAWV KSGGLRRSNF SPLQARKPNL RGKDSGFSYR PAAGRVVLID HAAEDTFELA
ADAELVVTIG DDTTTIAGDI LFRLGIPILG ITDGDCDRLA CRTVIFPGSI VLRLAAGNDD
VLGKKLKQEL LGGENSAILE DIYAFKEDVL KLAEPLIEAV FEY