Gene Mbar_A3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3709 
Symbol 
ID3624940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4781688 
End bp4783628 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content47% 
IMG OID637702542 
Producthypothetical protein 
Protein accessionYP_307152 
Protein GI73671137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG AGATCAACTG GTATGTGCGA GCCTGTAAAA TCACAGCGAG GAAATGGATA 
TGTTTTGTCC CTGATCCTGC AGCCTTCCGA AGGCGCTGCG AAAAGAGTGT AAGCCGAGAG
TACAGGGATG CCCTCAGGTT TACTGGTTAT GACCTTGAAG CTTTCGAAAC CGTGCTCTTT
TCCTATGTGG GGACCTTTGT AACTTTAATC CTGCTGGTCG GAGTAGATCT TTTCCTGATC
CTTTCAAGAA GTTTTGATGC CAGAGTGCTT ACTATAATGG GAGTCCTGAC ATTTATCATT
CCCCTGCTCG CACTCTATTA CCTGAGCGAG TATGTAAAGC TCAGGGCAGG GTTTATGAAA
ATTTCGTCAC TCGGAGACAT TCCTGAGATC CTGAGTTATA TAGTCATGTC CATGAAACTT
GTTCCTAATC TGGAGCATGC CGTGCTTTTT GCAGCCCGGA ACTCCGAAAG GCCGCTTGCA
AAGGACTTGA GAAAACTGGC CTGGGACCTG AACCTAAGGA TTTACAGCAG CATGGATGAT
GCTCTCCTTT CTTTTGCCGA CCTGTGGGGA AGAAATAGCG AATACTTCAA GCGTTCTCTC
CACCTTATAA AGAGCTCGAC AGCCGAGCCC GACGAAGCAC AGAGGGTTAT AACCCTGAAC
CGTGCCCTGG ACATAAGCCT TGAAGGTACG GAAAGCCTTA TGGACGCTTT TGCTGCAAAG
CTAAAGACTC CAAGTTATAT TCTCTACTCG ATTTTCATAC TGATTCCGCT CGCTCTGGTA
GCTCTTCTGC CTGCGGTTAC AGTTGTAGGA ATGAAACCTG AAATAATAGA CCTTATCTTC
CTCTACGACC TGATTTTCCC GGCTCTGGCT GCCCTTTACT CTGAATATAT TCTTATGCAG
AGGCCTGTTG CTTTTACTCC CAGGGAAATT CCGGATTCTC ATCCTTACCT TGCAGATATC
AAGCAAAAGA AACGCTTTGC TTTAATGCTT TCAGTCCTGG TATTCTGCCT TATCGCTCCT
CTGGGATATC TCCTGCTGAG GCTAGGAAAT CCGGGAGGAA TAGTATCAAC CGCGCCCCTT
GAAGGATATT TTTCACCTAC GCTTCCGCTT ATTCTGGGTG GAACAATCGG GATTTCAGTT
TACCTCTATT TTTCGGCTGT CCCTTACAAG AAGATAAGAG ATCGAATAAA AAAGATGGAA
CAGGAATTTG CAGATTCCCT TTTTGTGCTC GGGAGGAGAA TTTCGGAAGG GAAAGCCCCG
GAAGAAGCTT TTGCACATAC TGCCAGGACT ATGGAAGGCT CAAAAATCGG GGAAGCTTTT
CAGGAAATTT CAATGAACCT GCTCAGTATG AGGACAAATC TCAAAGCCGC GATTTTTGAC
GAAGATTTCG GAGCCTTCAG GCACGTATAT TCAGAAAGAA TCCGGAACAC AATGCTCCTT
TTTACGGAAA GTGTCCACAA AAACCATGAA GCTGCAGGCG CCTCGATTAT AAAGCTTGCA
GACCATCTAA AAGAGCTCGG GACAGTCGAG GAACGAATCC GGCGCTCTCT TTACGATGTC
ACCTCAACAA TGCGCTCCAC AGCTGTGATT TTTGCCCCAC TCATTGCAGG AATCACCCTT
GCCCTGTCGG AGGTCATTAC GAAAATTCTG AGCCAGGTAG CTGAAAGGGT AAACCGAATT
CCTGCCGATA TTTCAGAAAT GCCTGTTGAA ATCGGGCAGG CAGCTTTTTC CCAGTCAATT
TCTCCTGACC ATTTTCTGCT TGCAATAGGG GTTTATATTG TCCTGATCAG CGCTATTCTC
ACCCGCTTTG CAGGTTCGGT GGAATATGGA GGAGACCGGA CGCAGTTGAA ATACGACCTA
GCCTGCATGC TCCCGATTTC AATTGCGATA TTTGCAGTGT CTACCGCAAC CTCAAGAATT
ATCTTCAGGG GACTGGTGTG A
 
Protein sequence
MSEEINWYVR ACKITARKWI CFVPDPAAFR RRCEKSVSRE YRDALRFTGY DLEAFETVLF 
SYVGTFVTLI LLVGVDLFLI LSRSFDARVL TIMGVLTFII PLLALYYLSE YVKLRAGFMK
ISSLGDIPEI LSYIVMSMKL VPNLEHAVLF AARNSERPLA KDLRKLAWDL NLRIYSSMDD
ALLSFADLWG RNSEYFKRSL HLIKSSTAEP DEAQRVITLN RALDISLEGT ESLMDAFAAK
LKTPSYILYS IFILIPLALV ALLPAVTVVG MKPEIIDLIF LYDLIFPALA ALYSEYILMQ
RPVAFTPREI PDSHPYLADI KQKKRFALML SVLVFCLIAP LGYLLLRLGN PGGIVSTAPL
EGYFSPTLPL ILGGTIGISV YLYFSAVPYK KIRDRIKKME QEFADSLFVL GRRISEGKAP
EEAFAHTART MEGSKIGEAF QEISMNLLSM RTNLKAAIFD EDFGAFRHVY SERIRNTMLL
FTESVHKNHE AAGASIIKLA DHLKELGTVE ERIRRSLYDV TSTMRSTAVI FAPLIAGITL
ALSEVITKIL SQVAERVNRI PADISEMPVE IGQAAFSQSI SPDHFLLAIG VYIVLISAIL
TRFAGSVEYG GDRTQLKYDL ACMLPISIAI FAVSTATSRI IFRGLV