Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3709 |
Symbol | |
ID | 3624940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 4781688 |
End bp | 4783628 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637702542 |
Product | hypothetical protein |
Protein accession | YP_307152 |
Protein GI | 73671137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG AGATCAACTG GTATGTGCGA GCCTGTAAAA TCACAGCGAG GAAATGGATA TGTTTTGTCC CTGATCCTGC AGCCTTCCGA AGGCGCTGCG AAAAGAGTGT AAGCCGAGAG TACAGGGATG CCCTCAGGTT TACTGGTTAT GACCTTGAAG CTTTCGAAAC CGTGCTCTTT TCCTATGTGG GGACCTTTGT AACTTTAATC CTGCTGGTCG GAGTAGATCT TTTCCTGATC CTTTCAAGAA GTTTTGATGC CAGAGTGCTT ACTATAATGG GAGTCCTGAC ATTTATCATT CCCCTGCTCG CACTCTATTA CCTGAGCGAG TATGTAAAGC TCAGGGCAGG GTTTATGAAA ATTTCGTCAC TCGGAGACAT TCCTGAGATC CTGAGTTATA TAGTCATGTC CATGAAACTT GTTCCTAATC TGGAGCATGC CGTGCTTTTT GCAGCCCGGA ACTCCGAAAG GCCGCTTGCA AAGGACTTGA GAAAACTGGC CTGGGACCTG AACCTAAGGA TTTACAGCAG CATGGATGAT GCTCTCCTTT CTTTTGCCGA CCTGTGGGGA AGAAATAGCG AATACTTCAA GCGTTCTCTC CACCTTATAA AGAGCTCGAC AGCCGAGCCC GACGAAGCAC AGAGGGTTAT AACCCTGAAC CGTGCCCTGG ACATAAGCCT TGAAGGTACG GAAAGCCTTA TGGACGCTTT TGCTGCAAAG CTAAAGACTC CAAGTTATAT TCTCTACTCG ATTTTCATAC TGATTCCGCT CGCTCTGGTA GCTCTTCTGC CTGCGGTTAC AGTTGTAGGA ATGAAACCTG AAATAATAGA CCTTATCTTC CTCTACGACC TGATTTTCCC GGCTCTGGCT GCCCTTTACT CTGAATATAT TCTTATGCAG AGGCCTGTTG CTTTTACTCC CAGGGAAATT CCGGATTCTC ATCCTTACCT TGCAGATATC AAGCAAAAGA AACGCTTTGC TTTAATGCTT TCAGTCCTGG TATTCTGCCT TATCGCTCCT CTGGGATATC TCCTGCTGAG GCTAGGAAAT CCGGGAGGAA TAGTATCAAC CGCGCCCCTT GAAGGATATT TTTCACCTAC GCTTCCGCTT ATTCTGGGTG GAACAATCGG GATTTCAGTT TACCTCTATT TTTCGGCTGT CCCTTACAAG AAGATAAGAG ATCGAATAAA AAAGATGGAA CAGGAATTTG CAGATTCCCT TTTTGTGCTC GGGAGGAGAA TTTCGGAAGG GAAAGCCCCG GAAGAAGCTT TTGCACATAC TGCCAGGACT ATGGAAGGCT CAAAAATCGG GGAAGCTTTT CAGGAAATTT CAATGAACCT GCTCAGTATG AGGACAAATC TCAAAGCCGC GATTTTTGAC GAAGATTTCG GAGCCTTCAG GCACGTATAT TCAGAAAGAA TCCGGAACAC AATGCTCCTT TTTACGGAAA GTGTCCACAA AAACCATGAA GCTGCAGGCG CCTCGATTAT AAAGCTTGCA GACCATCTAA AAGAGCTCGG GACAGTCGAG GAACGAATCC GGCGCTCTCT TTACGATGTC ACCTCAACAA TGCGCTCCAC AGCTGTGATT TTTGCCCCAC TCATTGCAGG AATCACCCTT GCCCTGTCGG AGGTCATTAC GAAAATTCTG AGCCAGGTAG CTGAAAGGGT AAACCGAATT CCTGCCGATA TTTCAGAAAT GCCTGTTGAA ATCGGGCAGG CAGCTTTTTC CCAGTCAATT TCTCCTGACC ATTTTCTGCT TGCAATAGGG GTTTATATTG TCCTGATCAG CGCTATTCTC ACCCGCTTTG CAGGTTCGGT GGAATATGGA GGAGACCGGA CGCAGTTGAA ATACGACCTA GCCTGCATGC TCCCGATTTC AATTGCGATA TTTGCAGTGT CTACCGCAAC CTCAAGAATT ATCTTCAGGG GACTGGTGTG A
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Protein sequence | MSEEINWYVR ACKITARKWI CFVPDPAAFR RRCEKSVSRE YRDALRFTGY DLEAFETVLF SYVGTFVTLI LLVGVDLFLI LSRSFDARVL TIMGVLTFII PLLALYYLSE YVKLRAGFMK ISSLGDIPEI LSYIVMSMKL VPNLEHAVLF AARNSERPLA KDLRKLAWDL NLRIYSSMDD ALLSFADLWG RNSEYFKRSL HLIKSSTAEP DEAQRVITLN RALDISLEGT ESLMDAFAAK LKTPSYILYS IFILIPLALV ALLPAVTVVG MKPEIIDLIF LYDLIFPALA ALYSEYILMQ RPVAFTPREI PDSHPYLADI KQKKRFALML SVLVFCLIAP LGYLLLRLGN PGGIVSTAPL EGYFSPTLPL ILGGTIGISV YLYFSAVPYK KIRDRIKKME QEFADSLFVL GRRISEGKAP EEAFAHTART MEGSKIGEAF QEISMNLLSM RTNLKAAIFD EDFGAFRHVY SERIRNTMLL FTESVHKNHE AAGASIIKLA DHLKELGTVE ERIRRSLYDV TSTMRSTAVI FAPLIAGITL ALSEVITKIL SQVAERVNRI PADISEMPVE IGQAAFSQSI SPDHFLLAIG VYIVLISAIL TRFAGSVEYG GDRTQLKYDL ACMLPISIAI FAVSTATSRI IFRGLV
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