Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3706 |
Symbol | |
ID | 3624937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4774226 |
End bp | 4776541 |
Gene Length | 2316 bp |
Protein Length | 771 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637702539 |
Product | hypothetical protein |
Protein accession | YP_307149 |
Protein GI | 73671134 |
COG category | [R] General function prediction only |
COG ID | [COG3291] FOG: PKD repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTA AAAGCAAGTT ATGTTCAATA GCTTTAGCTT CAACAACCTT AATTTTTATA TTTTTAGTTT TAATTTCAAA TTTAGCATCA GCAACGCAGG TGACAAAAAT TGGTAATGGG TCTGATCCTG CTATTTATGA TAACAAAGTA GTATGGACAA ATAGTGGTGT TATCCAGGTT TATGATTTGA ACGCCAGAAC AGTCACTACA GTTGATTCTT CTGCAGCATC TTATCCGGAT ATTTACGGTA ACATATTAGT GTGGCATGAT GAAAGCAGCA GGACACCAAG ACTTGCAGTA TACGATATAT CAACAACCGC AAAAACTTAC ATCACACAGA ATGTAGACCA ATACAGCAGA CCTGTTATTT ACGAAAATAG GATTGTTTGG AGTGCAGATT ACAATGAATC AAATTATAAT TACAACGTAT ATATGCGGGA CATATCAACT TCCAAGCAGA CTAAAATCGC AGATGGGAAC AATCCTGATA TATACGCTAC CAAAATAACA TTTGGTTATG ATGATGAAGA CGGGCGAAAC ATTGCTGTTT ATGATGTTAA TACTAAGGAG ACCATAACAG TAAGTCATGC TAGCCAGATA TTTAGTCCCC ATATATATGG TAATAAAGTG ATATGGTCAA ACTTCTATTC CAGGGACGGA TTTATTGAAA TGTATGACCT AATTACCAAA AAAACTATAG ATGTCACCAG TGATAATACA GGTAATACTT TATATGGGTC TGATACAGTT GATGCTGGAG ATGACACCGG TACTCATATT GACATAAACG GGGACAAAAT CGTATATTCA AAATCTGGCG ATGACCAGTT TGGTTATGCA GGTGTATACG TTTATGATAT TTCATCAGCA AAAAGCACTC CAGTTTACAT CTATCCAAAA GAGACTTACA CAACGCCGGA TGTGTACGAG AACACTATTG TATGGGGAAT AGACAGTAAC TACGGAAGGG GGGCAGCTAA CGATAGTGGC AATAATGGTA TATATCTAAG TGATCTTTCT GCCATAGACC CTTTGCCACA GGTAGCTGAA TTTACTGCCA ATGTGACTTA TGGAACTGCA CCTTTAGTTG TGTTATTTAC TACCAGCGGC ATCGATGGAG TTTCAACTTC ATGGCTCTGG GACTTTGGGG ACGGAATTAC CTCTAAAAAT GCAATGAATG CGACGCACAC ATTTACAAAA CCCGGCACAT ATGACGTTAC TCTAAAGGTA ACCAGTGCCA CTGGCAATAT TTCTATAGAT AAACTGGGTT ACATCAAGGT CACGAATTCA ACCACTCCAG ACCTGGGGAT TCCGGTTGCA AACTTCAGTA GCAGTGTTAC CGAGGGGTAT GCTCCCCTGG AAGTACAGTT TAATGATCTT TCCCAGAATG TAGTATCAAG GGTATGGGAC TTCGATTCCA ATGGAAAGGC TGACTCCAAT GACCCGAATC CCATTTATGT ATATGCTACT CCTGGTACAT ATTTTGTCAA CCTGACAATC TATAATGCAA ACGGTTTCTC TTACCTTATT AATACAATAA CTGTACTGGA AGGCAATTCC AGCGACGACA GCAATTCAAA CAGTGACGGA AGCAGCAAGA GTGGTGGCGG CAAAAGTAGC GGTAGCGGAG GAGGAGGTGG CTCTCCTGAA CCTGCAAAAA ACATTGAAGT AAAGGAACTT TCACAGGTGT TCATTACAAA TGGAAAAGAG GTAAAGTTTG ATTTTGCAAA GAACGCAACT TGCGTTGTTT CTGTGAACTT TGATGCAAAG AAGACTCTGG GCAAAACCAC AACCATTGTA GAGATGTTGA AAGGACAATC TTCTCTTGTC TCCGAACTGC CTTCTGGAGA TGTCTACAAA TCCTTTAATG TTTGGGTTGG AAACGGCGGA ATTGCAACCT CAAAGAACAT AGAAAACCCG ACCGTTTGTT TCAAGGTTGA AAAATCCTGG ATAGAAGATA AAAAAATCGA TCCAGCTTCA ATCACCCTTA ACAGTTACAA CGAGAAAAAA TGGGAACAGC TGGAGATAGA AACATCAGGA AAAGATGACA AATTCCTGTA TTTCACGGCA AAAACCCCGG AATTCTCTTC CTTTGCAATA ACAGGCACAG CAAAAAAAGC TTATGAGGAA ACTGCAACAG AATCCCAGTC TGAGACAGAG ACCGGAGCAG TTAATAAAAA CTATGTAAAT CAAAACGAAA CTGGGAACGA AGGAAAGGAA GCTGAACAAA AAGAAATTCC GGGTACACCT GGATTTGAAA TCGATTTAGG GATAGCCTGT ATCCTTGGCT TATTCCTTTA TAAGCGGAAG CACTAA
|
Protein sequence | MKIKSKLCSI ALASTTLIFI FLVLISNLAS ATQVTKIGNG SDPAIYDNKV VWTNSGVIQV YDLNARTVTT VDSSAASYPD IYGNILVWHD ESSRTPRLAV YDISTTAKTY ITQNVDQYSR PVIYENRIVW SADYNESNYN YNVYMRDIST SKQTKIADGN NPDIYATKIT FGYDDEDGRN IAVYDVNTKE TITVSHASQI FSPHIYGNKV IWSNFYSRDG FIEMYDLITK KTIDVTSDNT GNTLYGSDTV DAGDDTGTHI DINGDKIVYS KSGDDQFGYA GVYVYDISSA KSTPVYIYPK ETYTTPDVYE NTIVWGIDSN YGRGAANDSG NNGIYLSDLS AIDPLPQVAE FTANVTYGTA PLVVLFTTSG IDGVSTSWLW DFGDGITSKN AMNATHTFTK PGTYDVTLKV TSATGNISID KLGYIKVTNS TTPDLGIPVA NFSSSVTEGY APLEVQFNDL SQNVVSRVWD FDSNGKADSN DPNPIYVYAT PGTYFVNLTI YNANGFSYLI NTITVLEGNS SDDSNSNSDG SSKSGGGKSS GSGGGGGSPE PAKNIEVKEL SQVFITNGKE VKFDFAKNAT CVVSVNFDAK KTLGKTTTIV EMLKGQSSLV SELPSGDVYK SFNVWVGNGG IATSKNIENP TVCFKVEKSW IEDKKIDPAS ITLNSYNEKK WEQLEIETSG KDDKFLYFTA KTPEFSSFAI TGTAKKAYEE TATESQSETE TGAVNKNYVN QNETGNEGKE AEQKEIPGTP GFEIDLGIAC ILGLFLYKRK H
|
| |