Gene Mbar_A3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3706 
Symbol 
ID3624937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4774226 
End bp4776541 
Gene Length2316 bp 
Protein Length771 aa 
Translation table11 
GC content40% 
IMG OID637702539 
Producthypothetical protein 
Protein accessionYP_307149 
Protein GI73671134 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AAAGCAAGTT ATGTTCAATA GCTTTAGCTT CAACAACCTT AATTTTTATA 
TTTTTAGTTT TAATTTCAAA TTTAGCATCA GCAACGCAGG TGACAAAAAT TGGTAATGGG
TCTGATCCTG CTATTTATGA TAACAAAGTA GTATGGACAA ATAGTGGTGT TATCCAGGTT
TATGATTTGA ACGCCAGAAC AGTCACTACA GTTGATTCTT CTGCAGCATC TTATCCGGAT
ATTTACGGTA ACATATTAGT GTGGCATGAT GAAAGCAGCA GGACACCAAG ACTTGCAGTA
TACGATATAT CAACAACCGC AAAAACTTAC ATCACACAGA ATGTAGACCA ATACAGCAGA
CCTGTTATTT ACGAAAATAG GATTGTTTGG AGTGCAGATT ACAATGAATC AAATTATAAT
TACAACGTAT ATATGCGGGA CATATCAACT TCCAAGCAGA CTAAAATCGC AGATGGGAAC
AATCCTGATA TATACGCTAC CAAAATAACA TTTGGTTATG ATGATGAAGA CGGGCGAAAC
ATTGCTGTTT ATGATGTTAA TACTAAGGAG ACCATAACAG TAAGTCATGC TAGCCAGATA
TTTAGTCCCC ATATATATGG TAATAAAGTG ATATGGTCAA ACTTCTATTC CAGGGACGGA
TTTATTGAAA TGTATGACCT AATTACCAAA AAAACTATAG ATGTCACCAG TGATAATACA
GGTAATACTT TATATGGGTC TGATACAGTT GATGCTGGAG ATGACACCGG TACTCATATT
GACATAAACG GGGACAAAAT CGTATATTCA AAATCTGGCG ATGACCAGTT TGGTTATGCA
GGTGTATACG TTTATGATAT TTCATCAGCA AAAAGCACTC CAGTTTACAT CTATCCAAAA
GAGACTTACA CAACGCCGGA TGTGTACGAG AACACTATTG TATGGGGAAT AGACAGTAAC
TACGGAAGGG GGGCAGCTAA CGATAGTGGC AATAATGGTA TATATCTAAG TGATCTTTCT
GCCATAGACC CTTTGCCACA GGTAGCTGAA TTTACTGCCA ATGTGACTTA TGGAACTGCA
CCTTTAGTTG TGTTATTTAC TACCAGCGGC ATCGATGGAG TTTCAACTTC ATGGCTCTGG
GACTTTGGGG ACGGAATTAC CTCTAAAAAT GCAATGAATG CGACGCACAC ATTTACAAAA
CCCGGCACAT ATGACGTTAC TCTAAAGGTA ACCAGTGCCA CTGGCAATAT TTCTATAGAT
AAACTGGGTT ACATCAAGGT CACGAATTCA ACCACTCCAG ACCTGGGGAT TCCGGTTGCA
AACTTCAGTA GCAGTGTTAC CGAGGGGTAT GCTCCCCTGG AAGTACAGTT TAATGATCTT
TCCCAGAATG TAGTATCAAG GGTATGGGAC TTCGATTCCA ATGGAAAGGC TGACTCCAAT
GACCCGAATC CCATTTATGT ATATGCTACT CCTGGTACAT ATTTTGTCAA CCTGACAATC
TATAATGCAA ACGGTTTCTC TTACCTTATT AATACAATAA CTGTACTGGA AGGCAATTCC
AGCGACGACA GCAATTCAAA CAGTGACGGA AGCAGCAAGA GTGGTGGCGG CAAAAGTAGC
GGTAGCGGAG GAGGAGGTGG CTCTCCTGAA CCTGCAAAAA ACATTGAAGT AAAGGAACTT
TCACAGGTGT TCATTACAAA TGGAAAAGAG GTAAAGTTTG ATTTTGCAAA GAACGCAACT
TGCGTTGTTT CTGTGAACTT TGATGCAAAG AAGACTCTGG GCAAAACCAC AACCATTGTA
GAGATGTTGA AAGGACAATC TTCTCTTGTC TCCGAACTGC CTTCTGGAGA TGTCTACAAA
TCCTTTAATG TTTGGGTTGG AAACGGCGGA ATTGCAACCT CAAAGAACAT AGAAAACCCG
ACCGTTTGTT TCAAGGTTGA AAAATCCTGG ATAGAAGATA AAAAAATCGA TCCAGCTTCA
ATCACCCTTA ACAGTTACAA CGAGAAAAAA TGGGAACAGC TGGAGATAGA AACATCAGGA
AAAGATGACA AATTCCTGTA TTTCACGGCA AAAACCCCGG AATTCTCTTC CTTTGCAATA
ACAGGCACAG CAAAAAAAGC TTATGAGGAA ACTGCAACAG AATCCCAGTC TGAGACAGAG
ACCGGAGCAG TTAATAAAAA CTATGTAAAT CAAAACGAAA CTGGGAACGA AGGAAAGGAA
GCTGAACAAA AAGAAATTCC GGGTACACCT GGATTTGAAA TCGATTTAGG GATAGCCTGT
ATCCTTGGCT TATTCCTTTA TAAGCGGAAG CACTAA
 
Protein sequence
MKIKSKLCSI ALASTTLIFI FLVLISNLAS ATQVTKIGNG SDPAIYDNKV VWTNSGVIQV 
YDLNARTVTT VDSSAASYPD IYGNILVWHD ESSRTPRLAV YDISTTAKTY ITQNVDQYSR
PVIYENRIVW SADYNESNYN YNVYMRDIST SKQTKIADGN NPDIYATKIT FGYDDEDGRN
IAVYDVNTKE TITVSHASQI FSPHIYGNKV IWSNFYSRDG FIEMYDLITK KTIDVTSDNT
GNTLYGSDTV DAGDDTGTHI DINGDKIVYS KSGDDQFGYA GVYVYDISSA KSTPVYIYPK
ETYTTPDVYE NTIVWGIDSN YGRGAANDSG NNGIYLSDLS AIDPLPQVAE FTANVTYGTA
PLVVLFTTSG IDGVSTSWLW DFGDGITSKN AMNATHTFTK PGTYDVTLKV TSATGNISID
KLGYIKVTNS TTPDLGIPVA NFSSSVTEGY APLEVQFNDL SQNVVSRVWD FDSNGKADSN
DPNPIYVYAT PGTYFVNLTI YNANGFSYLI NTITVLEGNS SDDSNSNSDG SSKSGGGKSS
GSGGGGGSPE PAKNIEVKEL SQVFITNGKE VKFDFAKNAT CVVSVNFDAK KTLGKTTTIV
EMLKGQSSLV SELPSGDVYK SFNVWVGNGG IATSKNIENP TVCFKVEKSW IEDKKIDPAS
ITLNSYNEKK WEQLEIETSG KDDKFLYFTA KTPEFSSFAI TGTAKKAYEE TATESQSETE
TGAVNKNYVN QNETGNEGKE AEQKEIPGTP GFEIDLGIAC ILGLFLYKRK H