| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3701 |
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| Symbol | |
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| ID | 3624932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4765868 |
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| End bp | 4766980 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637702534 |
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| Product | transposase |
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| Protein accession | YP_307144 |
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| Protein GI | 73671129 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000275581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.14364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAAAG CGTTCAAATT TAGACTCTAT CCTACACCTA CGCAGTCTGT TCAATTGAAT
CAGCATATAG GTAGCTGTAG ATTTGTCTAC AATTGGGCGT TGGATCAAAA AATTAAAACT
TACGAACAAA CAGGAAAATC AATTTCCAGA TTTGACTTAA ACAAAAAGCT TCCCGTCTTG
AAAGCTTCTA ATGAATGGTT AGGAGAAGTC AATTCTCAAT CATTGCAGGG AATGACTAAG
CAGGTTGAGT CTGCCTTCAC TCGATTTTTC CGAGAGAAGA ACGGCTTTCC TAAGTTCAAA
TCTAAGAAAA ACCCAATTCA ATCTTTTCCT GTACCTCAAC ACTACTCCGT AGACTTTGAA
AACAACACAG TTAAGCTCCC TAAAATAGAA CCAATTAAAG CAGTTTTTCA CAGGAAGTTT
GAGGGCGAGC TTAAAACAGC TACTGTTTCA AGGACATGTA AAGGACATTA CTACATTAGT
ATCCTTGTTG AAGATGGGAA CGAACTTCCT ACAAAACAGA AGTATTCAGA ATCTACTACA
GTGGGTCTAG ATGTCGGGAT TAAAGATTTT GCTATACTTT CCACAGGAGA AACGATTGAG
AATCCTAACT ACCTGAAAAA CTCTTTGAAC AGGTTAAAGG TTCTTCAAAA AAGAGTATCA
AGGAAACAGA ACGGTTCTAA GAACAGGGTA AAAGCCAAAC ATAGGCTTGC TGTACTACAT
GACAAAATAA CTAATCAGAG GAACGACTTC CAGAACAAAC TCTCTTTTAA ACTCATAAGC
GAAAACCAAG CAATAGCTCT GGAAACTCTG AATGTTAAAG GAATGGTCAA GAATCATCAT
TTGGCACAGG CTATAAGTGA TTCCGCATGG AGCAGTTTTG TAACAAAACT AGAGTATAAA
ACTGAATGGT ACGGAAAAAC CATCCTGAGA ATTGGGCAAT TTGAATCATC TTCTAAAGTA
TGTCATGTTT GTGGATATCA TAATTCATAT TTGACATTAA AAGATAGAGA ATGGACTTGC
CCAGACTGTA AAACAAAACA TGATAGAGAT ATAAATGCCG CTATCAATAT CAAGAAATTT
GCTCTCATAG ATCAAAATCG AATTGGATTA TAA
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| Protein sequence | MMKAFKFRLY PTPTQSVQLN QHIGSCRFVY NWALDQKIKT YEQTGKSISR FDLNKKLPVL
KASNEWLGEV NSQSLQGMTK QVESAFTRFF REKNGFPKFK SKKNPIQSFP VPQHYSVDFE
NNTVKLPKIE PIKAVFHRKF EGELKTATVS RTCKGHYYIS ILVEDGNELP TKQKYSESTT
VGLDVGIKDF AILSTGETIE NPNYLKNSLN RLKVLQKRVS RKQNGSKNRV KAKHRLAVLH
DKITNQRNDF QNKLSFKLIS ENQAIALETL NVKGMVKNHH LAQAISDSAW SSFVTKLEYK
TEWYGKTILR IGQFESSSKV CHVCGYHNSY LTLKDREWTC PDCKTKHDRD INAAINIKKF
ALIDQNRIGL
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