| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3691 |
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| Symbol | |
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| ID | 3624635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4751603 |
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| End bp | 4752883 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637702523 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_307134 |
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| Protein GI | 73671119 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.219403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATCA GTGAAAGTAC AATCGATAGT ATGATAAAGG ACCTGCCTCT CCCTTCGAAT
ATCCTTAATA CTCTAAGAGA GGATGTCATC AAAGCCGGAG TAAGTAAGAA GGAAATGGAA
GAGATTATAG AACAGGTAAT GGAAGAATAT CGTAGCTCGT GCATTGAGCC CTGTGATGCT
GCCGGTGTGG TTGCAGCCCA GTCCATAGGG GAGCCGGGTA CTCAGATGAC AATGCGTACT
TTCCACTATG CTGGTGTGGC CGAGATTAAC GTTACTCTCG GTCTTCCCCG TCTTATCGAA
ATTGTGGATG CTCGAAAAAT TCCGAGTACT CCTATGATGA CAATTGCTCT TTCTAAAGAG
AATCCTGAAG ATTATGCTTA CGACAGGGAA AAGACAAGAG CCCTTGCCTG GGAAATTGAA
GCAACGAAAA TCGATCACAT TGCTGACGTG ACCACTGATC TTTCCCAGAT GAAATTGATA
ATTGACCTGC ACGAGAAGGC GATGGAAGGC AGGAACATTA CTATAGATCA GGTAAAAGAA
AAGTTCAACG AAGAATTGAA TGTAATGGTT ACCATTTCCC CGGATATAGA TAACCAGATT
ATTATTGCCC CGGGAGAACC TTCTTACAGG GAGCTTCTTC AGCTTGCAAA AAGTATCCAT
AATGTCACTC TGAAAGGGAT AGAAGGGATC AAGCGTGTGG TAGTTCGTAA GGAAGGGGAA
GAATACACAC TATATACTGA AGGTTCGGCC CTGCGTGAAG TGCTTCAGTT CGATGGTGTG
GACAAGACAA GAACAAGTAC AAATAATATT AATGAAATTT ATGAAGTGCT TGGGATCGAA
GCTGCAAGGA ATGCAATTAT CAAGGAAGCA ACAGACACCC TGCGCGAACA GGGTCTTACT
GTGGACATCC GGCATATTAT GCTCGTTTCC GATCTCATGA CCTGTGATGG AGAAGTAAAA
CAGATCGGAA GACACGGAAT TTCAGGTGAA AAGGCAAGTG TCTTTGCCCG TGCGGCTTTC
GAAGTTACGG TAAATCATCT GCTGGATGCA GGGATGCGCG GTGATGTGGA TCAGCTCCAG
GGGGTCACGG AAAATATTAT TGTTGGCCAG CCTATCCGTA TGGGAACTGG AGACGTGCAC
CTTATAACCA GAAGAAGAGA GGAAATTGAA GAAGCAGTAG AAGCGGCAGC GGCAGAAGCG
GCAGCGGCAG AAGCAGCAGA AGCGGCAGAA GCAGCAGAAG CGGCAGAAGC AGCAGAAGCA
GCAGAAGCAG CAGAAGAGTG A
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| Protein sequence | MSISESTIDS MIKDLPLPSN ILNTLREDVI KAGVSKKEME EIIEQVMEEY RSSCIEPCDA
AGVVAAQSIG EPGTQMTMRT FHYAGVAEIN VTLGLPRLIE IVDARKIPST PMMTIALSKE
NPEDYAYDRE KTRALAWEIE ATKIDHIADV TTDLSQMKLI IDLHEKAMEG RNITIDQVKE
KFNEELNVMV TISPDIDNQI IIAPGEPSYR ELLQLAKSIH NVTLKGIEGI KRVVVRKEGE
EYTLYTEGSA LREVLQFDGV DKTRTSTNNI NEIYEVLGIE AARNAIIKEA TDTLREQGLT
VDIRHIMLVS DLMTCDGEVK QIGRHGISGE KASVFARAAF EVTVNHLLDA GMRGDVDQLQ
GVTENIIVGQ PIRMGTGDVH LITRRREEIE EAVEAAAAEA AAAEAAEAAE AAEAAEAAEA
AEAAEE
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