| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3684 |
|---|
| Symbol | rps10p |
|---|
| ID | 3624628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 4745279 |
|---|
| End bp | 4745587 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637702516 |
|---|
| Product | 30S ribosomal protein S10P |
|---|
| Protein accession | YP_307127 |
|---|
| Protein GI | 73671112 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.273762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAAG CTAGAATTAG ATTGTCAGGC ATCAGTCCCA AAGATCTGGA TGGAGTCTGC
AATCAAGTAA AATCTATTGC GGAAAGAACA GGAGTTAACA TTTCAGGGCC TGTTCCGCTT
CCTACAAAGA AGCTTGTAGT TCCCACAAGA AAAAGCCCGA GCGGAGACGG AACTGCAACC
TGGGACCACT GGGAGATGCG TGTACACAAG CGTCTCATCG ATATCGCAGC AGATGAAAGG
GCACTTCGCC AGCTTATGAG AATTCAGGTT CCTAAAGATA TCAATATTGA AATCGTACTC
GAAGGATAA
|
|---|
| Protein sequence | MQKARIRLSG ISPKDLDGVC NQVKSIAERT GVNISGPVPL PTKKLVVPTR KSPSGDGTAT
WDHWEMRVHK RLIDIAADER ALRQLMRIQV PKDINIEIVL EG
|
|---|
| |