| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3677 |
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| Symbol | |
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| ID | 3624621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4734431 |
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| End bp | 4735993 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637702509 |
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| Product | oligopeptide ABC transporter, oligopeptide-binding protein |
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| Protein accession | YP_307120 |
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| Protein GI | 73671105 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.969921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0940549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCATTAA GGATGAAGTT ATCATTTGCC TGCACTGCAG TTTTTTTTAT TGCAGTCGTC
ATCTGTTCGG GTTGTGTTCA GACAGAAGGT TCTGAAGAAA AAGTTCTTCA CGTAGCTCTC
ACGACTGGCC CTGATACAGG AGGAAGCCTT GATCCCTCCC TTTCATGGGA AGGCTGGCCT
ATGCGAAGAA CCGGAGTCTA TGAGACGCTC TTCTCTTACG ACAAAAACAT GAGTCTCCAG
CCTGAACTTG CAACAGGCTA TAAACAGCTA AATGATACAG CATGGGAAAT TCAGCTCCGC
AGGAATGTAA CCTTCCATGA CGGAACAAAA ATGAATTCTG ACGCCGTTAT TTATTCTATC
AACAGAGTTC TTAACTCATC AAACAGCCGT TCTGCAGAAT ACTCTTTTAT CAAAGACGTC
TACAAAACCG ATGACTACAC AATCGTTGTG GAAACAAATG AAGCATACGC GCCAACGATT
CTCATGTTCA CAGACACCAT CATGTCCATT GTAAGTCCTA AAGCCAGTGA TCTCGACAAA
GAGCCAGTTG GAACAGGGCC ATACAAGTTT GTTTCATTTG AGCCGGGTGC CAGTATAGAA
CTGGTAAAGA ATCCTGATTA CTGGGGCGGA GCACCAAAAA TTGACAGGAT AGTTATCCAG
TACAGCAAAG ACGCCGCTGC AAGAACTCTT CTTCTCAAAT CAGGTGATGT TGACATTACA
AGAGACGTCC TGCAAAGCGA GTACGCAACT CTTGAAGCTG ATCCTGATAT TAATATCGTA
TCCAGAGAAA CGCTTAGAAC CTATTTCATG TACATTAACG AAGGAAAAGC ACCATTCGAC
GATGTAAGGG TTCGCCAGGC ACTCAATTAT GCAATTAACC GCCAGGAGAT TGTCGACACA
GCCCTCGAAG GTGTTGCCGG CTCTCCAGCA ATCGGAATAT TCCCTGACAT CATGCCATGG
AGTGCGAACG ACAAGATTGA AGCCTACGCT TATAACCCTG AAAAAGCTTT GAAACTCTTT
GCTGAGGCAG GAATCACGCA GGGAAGTGAT GGTAAGCTCT ATTACAACGG TAAGCCGTTC
GCAATTGAAA TCCAGACCTA TACAAAACAG GCAGCACACC AGCCAATGGC AGAAGTAATT
GCCGCTCAGC TTGAAAAAAT CGGCATCACC ACTACAATAA AAATTGCCGA AACAAATTCA
ATTAGCGCTG ACGCAGTAGC CGGAAATTAT GACCTTGCAC TCTATTCCTG GGGTGTTGCA
CCTGTAGGAG ATCCTGACTA TTTCGTGTCC AGCCACTTCC TTTCAAACGG AACCTACGCA
TCCACATGGC TACGCTATTC TAATCCTCAG GTTGATAAGT GGATTCTTGA AGCAAGGGCT
GAGACAGACA AAGAAAAACG TGCAGAACTC TACGACATGA TTCAGGAACA GGTCCAGAAT
GATGCGGTAC TGGTCTGTAT CGCATACAAG AAAGAAATTG ACGGACTCTC CCCCAATCTC
AAAGGTTTTG AAATTTATCC AAATGAATAC ACGTTCATTA CAAAGGAAAT GGAACTTGCC
TGA
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| Protein sequence | MALRMKLSFA CTAVFFIAVV ICSGCVQTEG SEEKVLHVAL TTGPDTGGSL DPSLSWEGWP
MRRTGVYETL FSYDKNMSLQ PELATGYKQL NDTAWEIQLR RNVTFHDGTK MNSDAVIYSI
NRVLNSSNSR SAEYSFIKDV YKTDDYTIVV ETNEAYAPTI LMFTDTIMSI VSPKASDLDK
EPVGTGPYKF VSFEPGASIE LVKNPDYWGG APKIDRIVIQ YSKDAAARTL LLKSGDVDIT
RDVLQSEYAT LEADPDINIV SRETLRTYFM YINEGKAPFD DVRVRQALNY AINRQEIVDT
ALEGVAGSPA IGIFPDIMPW SANDKIEAYA YNPEKALKLF AEAGITQGSD GKLYYNGKPF
AIEIQTYTKQ AAHQPMAEVI AAQLEKIGIT TTIKIAETNS ISADAVAGNY DLALYSWGVA
PVGDPDYFVS SHFLSNGTYA STWLRYSNPQ VDKWILEARA ETDKEKRAEL YDMIQEQVQN
DAVLVCIAYK KEIDGLSPNL KGFEIYPNEY TFITKEMELA
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