Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A3664 |
Symbol | |
ID | 3624608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 4723754 |
End bp | 4724413 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637702496 |
Product | hypothetical protein |
Protein accession | YP_307107 |
Protein GI | 73671092 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0137297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGACA ACTTACCGGA AAAAGGTGCA ATCGTTCAGA GAGACCGTGA AACCTATGCA ATCGCCCCTC ATATCCCAGG AGGAATTGCG GACCCTAACA CTCTCAGGAA GATAGCCGAC GTTGCAGAAA AATATGGAGC TGCTGCCCTT AAGATGACTT CTGCCCAGAG GATTGCAATC GTAGGCCTGA AGGAGGAAGA CCTTGACAAT GCGTGGGCTG ATCTGGATAT GAAACCCGGC GCCGCTGTAG GGCTTTGCGT AAGAAGTGTA AAGTTCTGTC CTGGGACTAC TTTCTGCAAG CAAGGAAAAC AGGATGCAGT AGGCCTGGGT CTTAAACTGG ATGAAAAATA CCACGGAATG TCGATGCCTT CCAAGTTCAA GATGGCAGTT TCCGGTTGTC CAAACTCTTG CTCTGAGCCT GCCATTAAGG ACATAGGGGT AATGGGTACT GCTAAAGGAT ATACCCTGAT GGTAGGAGGT GCTGCGGCTG CAAGTCCAAG ACTTGCTGAG GTTGTTGCAA AAAACCTGTC AGAAGAGGAA GTCCTTGACG CAATCGATAG AATTGTTAAT TTCTATAAAA ATTCTGGCAC GAAAAAGAGG CTTGGAAAAT TCATTGACGG CGTGGGTCTT GAGGAATTCA AAGCCCAGGT AGGCCTGTAA
|
Protein sequence | MKDNLPEKGA IVQRDRETYA IAPHIPGGIA DPNTLRKIAD VAEKYGAAAL KMTSAQRIAI VGLKEEDLDN AWADLDMKPG AAVGLCVRSV KFCPGTTFCK QGKQDAVGLG LKLDEKYHGM SMPSKFKMAV SGCPNSCSEP AIKDIGVMGT AKGYTLMVGG AAAASPRLAE VVAKNLSEEE VLDAIDRIVN FYKNSGTKKR LGKFIDGVGL EEFKAQVGL
|
| |