Gene Mbar_A3654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3654 
Symbol 
ID3624598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4711074 
End bp4711463 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content45% 
IMG OID637702487 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_307098 
Protein GI73671083 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.54942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0310299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTTGCA ATTTATCTCC CATGATTGAT TTTGATGCTT TGAAATCCGA GAAGGGTCTT 
ATCCTTGCTG TGGTTCAGGA CCAGCTTAGC AGGGAGGTGC TCATGTGCGC CTATATGAAC
CGGGAAGCCC TTGAGAAGAC CGTAGAGACC GGAATTACAC ACTTCTGGAG CAGAAGCAGA
CAGCAGTTAT GGAAAAAAGG AGAGACTTCA GGGCATGTAC AGAAAGTGAA AGAAATAAGG
GTTGACTGTG ACATGGACTC TCTTCTCCTG CTCGTGGAAC AGGTAGGTGG AGCCTGCCAT
ATGGGATATA GATCCTGTTT TTATAGAAAC CTTGAAGGAG AGGTTGTGGG AGAAAAGGTC
TTTGAGCCTG ATGAGGTATA TAAATCTTAA
 
Protein sequence
MFCNLSPMID FDALKSEKGL ILAVVQDQLS REVLMCAYMN REALEKTVET GITHFWSRSR 
QQLWKKGETS GHVQKVKEIR VDCDMDSLLL LVEQVGGACH MGYRSCFYRN LEGEVVGEKV
FEPDEVYKS