| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3653 |
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| Symbol | |
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| ID | 3624597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4709027 |
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| End bp | 4711006 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637702486 |
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| Product | glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) |
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| Protein accession | YP_307097 |
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| Protein GI | 73671082 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.507852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0295807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAA TCAGGTTTGG AGCAGATTCC TTTTCCACAT ACGAGGAAGG AATAAAGAAA
GAGTGGATCG TAGGAAACGG ACTCGGGGGA TATGCCTCAT CTACAGTAAT AGGGACAGGC
ACAAGGACTT ATCATGGACT GCTTGTGGCA GCTCCAGAAA ACCCACCAGG AAGGTTTGTA
TTGCTTTCTT CCCTTGATGA GGAAGTTTCG ATTAACAAGG AAGTTTATCA GCTTGCAACC
CATAAGTATC CTGATACTGT GTTTCCTTCA GGCTTCAGTT ACCTCTCCAA ATTTATCCTT
GTTCCTTTTC CTCTCTGGGT TTACCAGCCC GGAGACTTTA CCATAAAGAA AAAAGTCTTC
ATGATTCACA ACAGCAACAC AACCTGCATT CTCTATGACA TTAAATCCAG GAGAGAAGGA
GCTCTGCTAA GAATCTTTCC GCTGGTAAAT TCCAGAAATT TCCATTACAC TGTTCATTCA
GGAGAACTTT CCTTTAGTCA GAAGGCCGAT CCTGCAGGAG TAAAATTGGA AAGCTCTAAC
GGCTGTACCT TCTCGCTTTC ATCCAATCTT CAATATCATT CCGATCCTAA ATGGTACTAT
AACTTTGAGT ATGATACTGA GAAGCAAAGG GGACTCAACT TCCAGGAAGA TAATTTCAAT
CCGGGTTACT TTGAAAGCAA ACTCAAACTG GGTACCTCCC ATTTTTTCAT TGCCGCTTCA
ACCGAAGATA TTTCTTCTCT GACGCTCGAA CAGGTTGAAG AATCCTATAC AAGAGAAACC
TACCGACAAA ATCTTCTTGC CTTCAATTCA AGGCTTACCG AACCCTTTGC TCTTAAGCTT
CTCAGGGCAA CAGACTCTTT TATAGTGAAG AATCCTTCTT CAGGTGAAAG TACAGTGATT
GCAGGATATC ACTGGTTTTC AGACTGGGGG CGGGACACTA TGATCTCTAT TCCTGGCTTG
CTTTTAATTC CCCGTCGTTT TGAAGAGGCA AAATTCATTC TCAAAAACTT TTCCAGGAAT
TGTAAGAGAG GCCTGATCCC GAATGCTTTT CTGGCACTTG GAGGGGAACC AATTTATAAC
ACTGTGGACG CTTCTCTCTG GTTTATTCAC ACTGTGGGCC GATATTTCGC ATATACGAAA
GACTTCCTTT TCCTCTCGGA TGTCTGGGAT ACCGTGGAGA ACATCATAGA GAATTACCGT
AAAGGTACGG ATTTTGGAAT TGGCATGGAT TCCGATTATC TTATCCGTCA GGGTCCTCAG
TTAACCTGGA TGGATGCTAA AATAGGGGAA CAAGCAGTGA CCCCAAGAGC AGGCAAAGCC
TGTGAAATTA ATGCTCTATG GTATAATGCC CTGAAAACAG CCTCTAATCT GGGCACTCAT
TTAGGAAAAA ATATTTCCTC ATATGAAACT CTTGCAGCCG GAGTAGCTTC AAATTTTGAG
AGTGTATTCT GGAATCCGGA GACAAATTGC CTCTTTGACC TCGTGTCTCA GGACGAAGCA
GGAAATGAGA TAAAAGACCC TGCGATCCGC CCCAACCAAA TCTTCGCAGT AGCTATGCCT
TATACTAGTC TGTCACTTGA GAAAGAAAAA GCAATAGTAA GGAGAGTTGA AAAAGATCTC
CTTACTCCTT TTGGGCTTAG AACTCTTTCA AGTGACCATC CTGCTTATAA AGGACACTAT
CAAGGAGATG CGGCAGCCAG AGATGCCGCC TATCATAACG GGACGGTCTG GCCCTGGCTC
CTTGGAGCTT ATGTGAAAGC TTACCGGAAG GTTCACAACT ATTCTAAAGA AAGCCTTGAA
GATATGCGGG CTCTCCTGCA GGGTTTTGAT ACGCACCTTG AAACTGCAGG CATAGGCACA
ATTTCCGAAG TATTTGACGG GGATTATCCT TATACTCCAG GAGGCTGCAT TGCTCAGGCC
TGGAGCGTTG CGGAAATTCT CAGAGCGTAC GTTGAGGATG TACTTGGAAT CAAACCCTGA
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| Protein sequence | MSGIRFGADS FSTYEEGIKK EWIVGNGLGG YASSTVIGTG TRTYHGLLVA APENPPGRFV
LLSSLDEEVS INKEVYQLAT HKYPDTVFPS GFSYLSKFIL VPFPLWVYQP GDFTIKKKVF
MIHNSNTTCI LYDIKSRREG ALLRIFPLVN SRNFHYTVHS GELSFSQKAD PAGVKLESSN
GCTFSLSSNL QYHSDPKWYY NFEYDTEKQR GLNFQEDNFN PGYFESKLKL GTSHFFIAAS
TEDISSLTLE QVEESYTRET YRQNLLAFNS RLTEPFALKL LRATDSFIVK NPSSGESTVI
AGYHWFSDWG RDTMISIPGL LLIPRRFEEA KFILKNFSRN CKRGLIPNAF LALGGEPIYN
TVDASLWFIH TVGRYFAYTK DFLFLSDVWD TVENIIENYR KGTDFGIGMD SDYLIRQGPQ
LTWMDAKIGE QAVTPRAGKA CEINALWYNA LKTASNLGTH LGKNISSYET LAAGVASNFE
SVFWNPETNC LFDLVSQDEA GNEIKDPAIR PNQIFAVAMP YTSLSLEKEK AIVRRVEKDL
LTPFGLRTLS SDHPAYKGHY QGDAAARDAA YHNGTVWPWL LGAYVKAYRK VHNYSKESLE
DMRALLQGFD THLETAGIGT ISEVFDGDYP YTPGGCIAQA WSVAEILRAY VEDVLGIKP
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