Gene Mbar_A3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3648 
Symbol 
ID3624592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4702082 
End bp4703179 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content41% 
IMG OID637702481 
Producthypothetical protein 
Protein accessionYP_307092 
Protein GI73671077 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACG TTCTGCCTCC ACAGAACAAT GTCATCGCGT TTGTGCCAGC TCATAATGAG 
GCGGATATAA TCCACTCAAC CATAGAATCC ATTCTTACTC AAACAGTCAA AGTCGATGTT
ATTGTAATAA GTGATAACAG TACAGATGAT ACGGTTAGTA TAGTAAGAAG TATAGCTGCC
ATTGATGACC GCGTAAGTTT GATAGAAACT GTTGGGAATA AATTTAAAAA ATCTGGGGCA
CTGAACACTG CCTATAAAAA TGTCGATCTG AATTCATATG ATTATGTACT ATCAGTCGAT
GGTGATACAA TCGTAGCTCC AGATCTTGTT GAACAAGCAT TAATAGAATT TCAGCTAGAT
CCACTACTCG GGGCAGTGTG CTCTCGTGCA GGTGTAGTCA AACAGACAAC TAACGGGTTT
TTTGAAAAAT TAGTCTATCA CTGGCAGTAT GTCGAATACG CAGAATTCGA CAGAAGCCGA
GTTAGTCAGG ATCGGGGGAT TAAAGTCGCG CACGGGATGT GCACAGTGTA TAAGGTAGAA
GCAATAAAAG CAGTTATGGC AAGACGCATA GCTACTGGAA AACTTGACTG CACTTTATAT
GATATGCATA ACATCACCGA AGATTACGAG TTAACGGTAA CTCTAAAAGA GCTTGGTTAC
CACACAGCTG CAGGTTTTGG GATGCATGCC TGGACAGACG TTCCATTAAA ACTAAGCGAG
TTATGGAAGC AACGAGTCCG CTGGCTTCGT GGTGGGCTTG ATACATTGTG GGAGCATGGA
TGGAATAAAA GCACCAGAAA AGACATCCTG AACGCCGGAC TCTTCTGGAT TATGTTATCT
TTCCAGATTC TTTTGCTAAA TTATGCTTTG TATGACATAG TTAAGGGTGC TTATCATCCC
AACTGGATGT TCATAATGGT AATGAGTTTA ATGTATGTGG ACAGTGTTTA CACACTGCGA
TATGTGCAGG ACCTCAGTAA GTGGGACTAT CTTGTGAGAA TAACGTTTAT TCCTCAGATA
TTTTATGCGT GGTTTACTAT TGCTCAGCTA GTCTATGCAT ACTACCTCTT TCTCTTTAAA
CCTAATCAGG ATTGGTAA
 
Protein sequence
MTNVLPPQNN VIAFVPAHNE ADIIHSTIES ILTQTVKVDV IVISDNSTDD TVSIVRSIAA 
IDDRVSLIET VGNKFKKSGA LNTAYKNVDL NSYDYVLSVD GDTIVAPDLV EQALIEFQLD
PLLGAVCSRA GVVKQTTNGF FEKLVYHWQY VEYAEFDRSR VSQDRGIKVA HGMCTVYKVE
AIKAVMARRI ATGKLDCTLY DMHNITEDYE LTVTLKELGY HTAAGFGMHA WTDVPLKLSE
LWKQRVRWLR GGLDTLWEHG WNKSTRKDIL NAGLFWIMLS FQILLLNYAL YDIVKGAYHP
NWMFIMVMSL MYVDSVYTLR YVQDLSKWDY LVRITFIPQI FYAWFTIAQL VYAYYLFLFK
PNQDW