| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3645 |
|---|
| Symbol | |
|---|
| ID | 3624589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4696915 |
|---|
| End bp | 4698078 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637702478 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_307089 |
|---|
| Protein GI | 73671074 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3274] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.110018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTAC AGAAAAATAG AATAGAAGAA ATTGATTATC TGAGAGGACT TGCTATATTA
GCTGTAATAG CTATTCATAC TTCTGCTAAT TTCACAGAAA TACGAGATAT AAATCTGTTA
TTAATAATAA ATGTGATAAT AGATGTATTT TCACATTTTG CGGTTCCATC GTTCATATTT
ATATCTGGTT TTGTACTCTC TTTTATTTAC AAGGGCCAGT TTTCAAAAAA AAGATTTTAT
GCAAAAAGAG TTAAATCAAT ACTTCCTCAA TATATTATCT TCTCTGTTTT TTATACACTA
TTAAATATAG GATTATCTAC GATAAATGGC AAAGCCAATT CACCTTCTAT ATTAACAATG
ATAATAAATT TGCTCACCAC AAGTAGTTCC TATCATTTAT GGTACTTTGC TGTGATAGGA
CAGTTTTACA TATCCTACCC TTACATAATA AAAATATATA ATAAATTTGC AGATAATAAT
AGGACACTCT ATTTTGCAGG TATAATTTTA ATAATTCAAC AAATATGGAT AGTAGTGAGT
GATTTTGCTC AAACCGTCTT AGAGATGTCA ACTTATCTAA ATTCAATAAA TTATTATTTA
AACCTCCTTA TAAACTCCTG GCTATCACTC ATATTTCTTT CTTACATATT TTACTTTGTA
CTTGGAATTT ATGCATGTCA AAATTACAAA AATGTAAAGA AACAAATTTT AAAGGTTAAA
ACGTGGGTTA TTCTAGCAAT CCTGGTTATG ACAGGAATTA TTTCTCTGTT ATTTATAAAA
GGCATTATTA GGTACGGAGA TTATTACGAA ATTCCACATA CTTATTTTAT GCTTCTAACC
CTTATTGAAT CATTATACTT CCCATTGACT ATTTTAATAG CTTTAATAAT TAGTTTGACT
TTTTCAATCC AGAAAAATAA ATATTCACAC ATTATTTTAT CATTAGGAAA ATATTCGTTT
GGAATATATC TAATTCATGT ATTTTATATA GATATTATTA CTCAAATAGT ATATCCACAT
TTTGAGATAT CTAGTAACCA ATTGGTATTT TACCCGGTTT TATTTCTATC AACAGTCTTG
TTAAGTTATT TCAGTGTAAA TCGAATTGCT CATTTGCATA GAAGTAAAAC AATGATCGGA
GTTGAATCAT TAAACCCAAA ATAA
|
|---|
| Protein sequence | MNLQKNRIEE IDYLRGLAIL AVIAIHTSAN FTEIRDINLL LIINVIIDVF SHFAVPSFIF
ISGFVLSFIY KGQFSKKRFY AKRVKSILPQ YIIFSVFYTL LNIGLSTING KANSPSILTM
IINLLTTSSS YHLWYFAVIG QFYISYPYII KIYNKFADNN RTLYFAGIIL IIQQIWIVVS
DFAQTVLEMS TYLNSINYYL NLLINSWLSL IFLSYIFYFV LGIYACQNYK NVKKQILKVK
TWVILAILVM TGIISLLFIK GIIRYGDYYE IPHTYFMLLT LIESLYFPLT ILIALIISLT
FSIQKNKYSH IILSLGKYSF GIYLIHVFYI DIITQIVYPH FEISSNQLVF YPVLFLSTVL
LSYFSVNRIA HLHRSKTMIG VESLNPK
|
|---|
| |