| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3623 |
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| Symbol | trpA |
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| ID | 3626325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4656725 |
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| End bp | 4657516 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637702453 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_307068 |
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| Protein GI | 73671053 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGAGGC AAAAAATCTC CGAAAAATTC TCCGAACTCA GGGAAAAAAA GGAAGGTGCT
CTGATCTGTT ACGTAATGGC AGGAGACCCG TCCGCAGAAA AAACCGGGGA AATTGTAAAA
GCTCTGGTGA ACGGAGGTGC GGATATCATA GAACTAGGTT TTCCCTTCTC AGACCCTGTA
GCGGACGGCC CGACAATCCA GGTGGCAGGA CAGAGGTCAC TTGCAGCAGG AATGGATACA
CAGCGTTATT TTGAGCTTAT TAAAAACCTG GATGTTGGAA TTCCACTTGT TTGCATGACC
TATTACAACC CTGTATTCAG GTACGGAGTG GAAAAATTTG TAGAAAAGGC TGCAGATGCC
GGAATAAGCG GACTGATAGT ACCCGATATC CCGGTTGAAG AAGCGGCTGA CCTGAAAAAT
AGCTGTGAAA AGCACGGGCT TGACCTTATC TTTCTAATTG CACCCACAAC AACCGAGGGA
AGAGTCCAGA AAATCCTGGA AAGAGGTTCA GGTTTCCTTT ACCTTGTCTC GAGGCTTGGG
GTCACTGGAG CCAGGGAAGA TGTCTCATCC TCTACCAGAG AGCTACTTTC CAGAGTAGAA
ACCGGGCTTC CTAAGGCTGT GGGATTTGGA ATCTCAACAG GAGAGCAAGC TGCAGAAGTT
AGAGACGCCG GAGCAGATGC AGTTATAGTC GGCTCGGCTT TTGTTAAGAT TATAGATGAA
GGAAAAGACG TAAACGAAAG GCTGGAAGCC CTTGCAAAGG AACTCAAATC CGGCATCAAA
AGAGCCAGTT AA
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| Protein sequence | MERQKISEKF SELREKKEGA LICYVMAGDP SAEKTGEIVK ALVNGGADII ELGFPFSDPV
ADGPTIQVAG QRSLAAGMDT QRYFELIKNL DVGIPLVCMT YYNPVFRYGV EKFVEKAADA
GISGLIVPDI PVEEAADLKN SCEKHGLDLI FLIAPTTTEG RVQKILERGS GFLYLVSRLG
VTGAREDVSS STRELLSRVE TGLPKAVGFG ISTGEQAAEV RDAGADAVIV GSAFVKIIDE
GKDVNERLEA LAKELKSGIK RAS
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