Gene Mbar_A3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3589 
Symbol 
ID3625813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4607422 
End bp4608033 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content40% 
IMG OID637702420 
Productsuperoxide dismutase 
Protein accessionYP_307037 
Protein GI73671022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0641051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0607523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAG AATTGTACAA ATTACCACCT TTAAAATTTG GATATGGAGA CCTGGCACCT 
TATATTTCTG AAGAGCAGCT CAAGTTACAT CATGACAAGC ACCATCAGGC TTATGTGACT
AATGCAAATG CAGCTATAGA AATGATGGAT AAAGCAAGGA AAGAAGGAAC TGACTTTGAT
TATAAAGCAA CTGCAAAAGC CTTTTCTTTT AATCTGGCCG GGCATGTCCT TCACGATTAT
TTCTGGTGGG AGATGACTCC TGCAAGCAAT TCAAGCAAAG AGCCTGTCGG AGAATTGTCT
GAAGTCATCA AAGAAGATTT CGGAAGCTTT GACAGGTTTA AAAAGGAATT TTCCCAGGTA
GCATCAAGTG TGGAAGGATC AGGATGGGCG GTATTAACCT ACTGTAAAGA TACTGAAAGG
CTCATGATCA TGCAGATAGA AAAGCATAAT GTAAATCTTG TCCCTGACTA TCCGATTATT
ATGGATCTGG ATACCTGGGA ACACGCTTAC TATATTGATT ACCGCAATGA CAGGGCAAAA
TTCATAGAGG CTTTCTGGAA TATAGTCGAT TGGGAAGAAA TCGACAAATA CTTCAGGAAA
ATGAGGAAAT AA
 
Protein sequence
MAKELYKLPP LKFGYGDLAP YISEEQLKLH HDKHHQAYVT NANAAIEMMD KARKEGTDFD 
YKATAKAFSF NLAGHVLHDY FWWEMTPASN SSKEPVGELS EVIKEDFGSF DRFKKEFSQV
ASSVEGSGWA VLTYCKDTER LMIMQIEKHN VNLVPDYPII MDLDTWEHAY YIDYRNDRAK
FIEAFWNIVD WEEIDKYFRK MRK