| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3579 |
|---|
| Symbol | |
|---|
| ID | 3625803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 4593148 |
|---|
| End bp | 4593855 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637702410 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_307027 |
|---|
| Protein GI | 73671012 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0715591 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTTTA CAAAAAGTAA CAAATATGAT TTTGATTTTG TTAAAGAAAA CATGATGGGA
CCAAACTCAA TGAAGATTCT TGAAGAAGTG TCCGAGTCTC TGAAGCTTGA GAAAGGCATG
AGAATACTTG ACCTTGGCTG TGGGAGAGGG CTGACCTCAA TATTCCTAGC AAAAGAATAT
GATGTTACAG TTTTTGCCAC TGATCTCTGG ATAAGTGCAA CAGATAACTA TGGGAGAATT
AAGTCAATGG GACTGGAAGA TAAAATAATA CCAATACACA CAGAAGCCCA TGATTTGCCG
TTTGCAAATG AATTTTTTGA TGCTGCTATC TGTATAGATG CCTATAATTT TTTCGGAGCT
GAAAAAGATT ATCTGAAGAA TCATTTTGCT CCGCTTGTAA AAAAAGGAGG AAAAATTGCA
GTTGCAGTTC CTGGATTGAA AAAGGATTTT ACAAACGGAG TTCCGGAAGA ACTACAGCCT
TACTGGTTTG ATGATATGAA TCTTTACTCC TGTGACTGGT GGTATAATTT ATGGAAAACT
TCCGATCTGG TAAATATTCA GGAGTGTAAA GAGTTAAATT GTTTTGAAGA AGCATGGAAA
GACTGGCTTA TGTGTGACAA TGACTTTGCT CGTAGAGATA TAGGAATGAT GGAAGCTGAA
GGTGGAAACT ACTTTAATCT GGTTTCAATC ATAGCTACAA AGTTATGA
|
|---|
| Protein sequence | MMFTKSNKYD FDFVKENMMG PNSMKILEEV SESLKLEKGM RILDLGCGRG LTSIFLAKEY
DVTVFATDLW ISATDNYGRI KSMGLEDKII PIHTEAHDLP FANEFFDAAI CIDAYNFFGA
EKDYLKNHFA PLVKKGGKIA VAVPGLKKDF TNGVPEELQP YWFDDMNLYS CDWWYNLWKT
SDLVNIQECK ELNCFEEAWK DWLMCDNDFA RRDIGMMEAE GGNYFNLVSI IATKL
|
|---|
| |