Gene Mbar_A3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3577 
Symbol 
ID3625801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4591484 
End bp4591897 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content42% 
IMG OID637702408 
Producthypothetical protein 
Protein accessionYP_307025 
Protein GI73671010 
COG category[R] General function prediction only 
COG ID[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.179326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAT TAACTGACGA AATGAAGGAA GACTTTGCAA AGATGAAAAT TTTTCCATTT 
GCAACTGCAT CTAAAGGTGG AGAACCAAAT GTCATACCAA TAGGCATGTG TGATCTACAG
GAAGATGGAG AAACAATCTG GATCGCAGAC AATTATTTTA ATAAAACTCG CAACAATCTT
GATGAAAACC CCAGGGGAGC GATCTATGTA TGGGGTCCGG AAATCAAAGG CTGCTACCAG
ATAAAAGGAG ATATTGAGAT CAAGACCGAA GGGGAAGACT ATGAGAAGAT GTATAAAATG
GTCAAAAGCA AAGGAGACAG GTTCCCTGGA AAAGCCCTTG CAGTTCTGAA AATTACTGAT
GTTTATGAGT GCAAACCCGG GGCTGGGACC GAGCCAGGAC AGAAACTGCT TTGA
 
Protein sequence
MVKLTDEMKE DFAKMKIFPF ATASKGGEPN VIPIGMCDLQ EDGETIWIAD NYFNKTRNNL 
DENPRGAIYV WGPEIKGCYQ IKGDIEIKTE GEDYEKMYKM VKSKGDRFPG KALAVLKITD
VYECKPGAGT EPGQKLL