Gene Mbar_A3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A3576 
Symbol 
ID3625800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp4590592 
End bp4591362 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content46% 
IMG OID637702407 
Producthypothetical protein 
Protein accessionYP_307024 
Protein GI73671009 
COG category[S] Function unknown 
COG ID[COG3369] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.327098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.196355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGTG ATCCTGCCAT AGAAAGTTTT GAGAAACTCA GACACAGAGG AGGCTGCAAG 
ATGATCAAAG AAGTGGAAAA AAAGTCAAAA ATATCCAATG ACTCCATGAA GATTGCTGTG
TTTAAGAACG GTCCATATAT GGTGACCGGT AGAGTTCCCC TTATGACCTG GGAGATTTGC
AAAGATGAAG ACACTGACCG TCTAATATGG CGCGAAGTCA AAAAATACCC TATAAGGGAC
CGGTATGCTC TGTGCCGATG TGGTCAGTCA GGGAATAAGC CCTTCTGTGA TGGGACACAT
TCAAAGATCC ATTTTGATGG AACCGAGGCA GGAGACTTTG AGCCCTTTAG CGAAGGTGCT
AATGTTATCA CTGGCCCTTT GCTGACTCTT ATTGACAATA AGCATCTATG TGTCCACGCA
GGATTCTGTA CACGGGCAGG GAAAATATGG AACCTTGTCC AGCAACCCGA AAACCCGGAA
GCTCGAGACA TTGCTATAGA AGAAGCATGT AACTGCCCTT CAGGCAGGTT GGTAATCATT
GACAATGCCA CAGGAAAAAC AATTGAGCCT GAGCTTGAAA AATCTATTGT TGTCGAGGAA
GGGCCTCACC AAGGCGAGCA AGGTCCTCTC TGGGTACGTG GCGGCATCCC GATAAAATCT
GCCGACGGCA AACAGTACGA GATCAGGAAT CGAGTCACTC TCTGCAGGTG CGGAAAATCC
AGAAATAAAC CGTTCTGCGA TGGTAGTCAT GTGGAGATTG AGAGAGATTG A
 
Protein sequence
MIGDPAIESF EKLRHRGGCK MIKEVEKKSK ISNDSMKIAV FKNGPYMVTG RVPLMTWEIC 
KDEDTDRLIW REVKKYPIRD RYALCRCGQS GNKPFCDGTH SKIHFDGTEA GDFEPFSEGA
NVITGPLLTL IDNKHLCVHA GFCTRAGKIW NLVQQPENPE ARDIAIEEAC NCPSGRLVII
DNATGKTIEP ELEKSIVVEE GPHQGEQGPL WVRGGIPIKS ADGKQYEIRN RVTLCRCGKS
RNKPFCDGSH VEIERD