| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3575 |
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| Symbol | |
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| ID | 3625799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4588477 |
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| End bp | 4590162 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637702406 |
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| Product | putative surface layer protein |
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| Protein accession | YP_307023 |
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| Protein GI | 73671008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.840675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.236267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCC TACCAATCTT TTTAATACTC ATTTTCTTTC TCACGTCTAC TGCTTCTGCA
ACAGTTACTG TATTCCCAAC CCCTCTTGGT GCAGGAAATC CTCCAGCAAC AGCCCGGGTA
AACTGCTCCT GCGGGAATAG TTATATTGAT TATACAGCGG TAGCCGTTTC AAGTGATCCA
CGAACAGTAC AATTTAAGGA TCTATCAAAA GGTAATGAGA CATATGTCAG ATGGAACTTT
GGAGATGGAA CCTCTCTCGA AGGTACAAAT ATTACTCCAT CACTAAAAAA TCCAGTACAT
ACGTTTCCAA AGAATGGCTA TTATATTAGT TGTATGACCA CCAGGAATAG TTGTTGTGGT
CAGAAGTTAT GGGTTCATAT GACTATTATT ATTACTGACG AAAACACTAC AGTACCTTTT
AAAACTCCAG TTGCTACTTT TTCGGCAGCT CCAACCTCAG GAGACGCTCC GCTAAAGGTT
CAGTTTACTG ACAAAAGTAC ACCATTTCCA TATACTGATA AGAATACAGG AATTTCAACT
TCATGGAAAT GGAGGTTTGG AGATAGCACA TATTCAACAG TTCAATATCC TGCACACACT
TACAGTAAAG CAGGGAACTA TACTGTCAGC TTAACAGTAA AGAATGCTGT GGGCAGCGAC
ACTAAAACAA TAAAGAACTA TATTGTTGCA AACAAGTTGA AAGCTCCAGT TGCTGCTTTT
TCGGCCTTCC CAACTTCAGG AAAAGCTCCA TTAAATGTTG CCTTTATTGA CAAGAGCACA
GGATCACCAG CTTCATGGAA ATGGAGCTTT GGAGACGGAT CAAGTTCATT CGCTCAGAAT
CCGACTCATA AGTATTCAAA AGCAGGAATA TATACTGTTA ACTTGACAGT AAAGAATGCT
AAAGGCAAGA ACACGGTAAC AAAAACACAA TATATAAAAG TGATAACAAA ACCGGTTGCT
GCATTCTCTG CATCCCTAAC TTTAGGAAAA GTACCTTTAA CTGTAAAATT TACTGACACA
AGTACAGGAA TCCCGACGAA ATGGCAATGG AGTTTTGGAG ACGGGTCAAA GTCATTCGTT
CAGAATCCAA AGCATAAGTA TTCAAAAGCA GGGAAATATA CCGTTAGCTT AACTGTAAAG
AATGATAAAG GCAGTAATAC AGTAACAAAA ACAGAATATA TAAAAGTAAT AACAAAACCT
ATTGCTTCAT TCTCCGCCTC CCCAACTTCA GGGAAAGCAC CATTAAATGT TGCCTTTACT
GACACAAGTA CAGGAACCCC GGCTAAATGG AAATGGACTT TTGGAGACGG AGCAAAGTCA
TTCGCTCAGA ATCCAAAGCA TAAGTATTCA AAAGCAGGAA GATATACCGT TAGCTTAACT
GTAAAGAATG ATAAGGGCAG TAATACGATA ACAAAAACAG AATATATAAA AGTAATAACA
AAACCTGTTG CTTCATTCTC CGCGTCCCCA ACTTCAGGGA AAGCACCATT AAATGTTGCT
TTTACTGACA CAAGTACAGG AACCCCGGCT AAATGGAAAT GGACTTTTGG AGACGGAGCA
AAGTCATTCG TTCAGAATCC AAAGCATAAG TATTCAAAAG CAGGGAACTA TACTATCAGC
TTAACAGTAA AGAATGCTAA GGGCAGTGAC ACTAAAACTA GATCTGATTA TATCGTAGTA
TCCTGA
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| Protein sequence | MKSLPIFLIL IFFLTSTASA TVTVFPTPLG AGNPPATARV NCSCGNSYID YTAVAVSSDP
RTVQFKDLSK GNETYVRWNF GDGTSLEGTN ITPSLKNPVH TFPKNGYYIS CMTTRNSCCG
QKLWVHMTII ITDENTTVPF KTPVATFSAA PTSGDAPLKV QFTDKSTPFP YTDKNTGIST
SWKWRFGDST YSTVQYPAHT YSKAGNYTVS LTVKNAVGSD TKTIKNYIVA NKLKAPVAAF
SAFPTSGKAP LNVAFIDKST GSPASWKWSF GDGSSSFAQN PTHKYSKAGI YTVNLTVKNA
KGKNTVTKTQ YIKVITKPVA AFSASLTLGK VPLTVKFTDT STGIPTKWQW SFGDGSKSFV
QNPKHKYSKA GKYTVSLTVK NDKGSNTVTK TEYIKVITKP IASFSASPTS GKAPLNVAFT
DTSTGTPAKW KWTFGDGAKS FAQNPKHKYS KAGRYTVSLT VKNDKGSNTI TKTEYIKVIT
KPVASFSASP TSGKAPLNVA FTDTSTGTPA KWKWTFGDGA KSFVQNPKHK YSKAGNYTIS
LTVKNAKGSD TKTRSDYIVV S
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