| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3574 |
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| Symbol | |
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| ID | 3625798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 4587312 |
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| End bp | 4588076 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637702405 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_307022 |
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| Protein GI | 73671007 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.426841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.115682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCAGG GAAGAGTTAT ATATGTTCTC TGGCGGCGTG AGATTATAAA GTATTTCAGG
GTCAGGTCCA GGATAGCGGG TGCAATTGGC ATGCCGGCTT TTATGCTGAT CTTTCAGGGT
ATGGGCTTTA GAAGAGTGGA ATTTCCAGGT CTGCCTGCGT CAATAGGATA TTTTCAGTAT
CTTGTACCGG GTATTATCGG GATGACTCTT CTTTTTACGG CTGCTTATGC AGGTATGAGT
GTCATAATGG ACAAGCAATT TGGATTTTTA AAAGAGGTTA TGGTGACTCC CGCAAGCAGA
GTCTCTATTG TTCTTGGAAT GATCTCCGGA AGCGCAACCA CATCAATCAT TCAGGCACTT
ATTATTATGT TGATGTCTGT ATTACTTGGT TTTAAACTGC CTTTAATTCA TGAGGTTCTG
TTCTCTATCG TGATAATGGT TCTCATATCT ATGATCTTTA TAAACATAGG GTTAATTTTG
TCATCCTTAT TGAAAGATTT TCATGGATTT AGCACGGTTA TTAATTTTAT TGCATTCCCT
CTGTTTCTTT TATCTGGAGC TTTATTTCCG GTTTCAAATT TGCCGGCTCC GATAAGGATT
CTATCTTATT TTGATCCGCT GACATATGGT GTTGATGCCT TGCGAGGAAT ATTGATTGAT
CATTGTGAAT TTTCAATTGT TCTGAATATA TCTATTCTTT TAACGCTGTC GGTTTTGATG
GTCTGTGCCA GCAGTTATTT CTTCCGGAGG GCAGAGATAA TATAG
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| Protein sequence | MIQGRVIYVL WRREIIKYFR VRSRIAGAIG MPAFMLIFQG MGFRRVEFPG LPASIGYFQY
LVPGIIGMTL LFTAAYAGMS VIMDKQFGFL KEVMVTPASR VSIVLGMISG SATTSIIQAL
IIMLMSVLLG FKLPLIHEVL FSIVIMVLIS MIFINIGLIL SSLLKDFHGF STVINFIAFP
LFLLSGALFP VSNLPAPIRI LSYFDPLTYG VDALRGILID HCEFSIVLNI SILLTLSVLM
VCASSYFFRR AEII
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